2022年9月22日,周涠、毕文健、赵张琛等在Nature Genetics杂志上发表工作SAIGE-GENE+ improves the efficiency and accuracy of set-based rare variant association tests。基于SAIGE-GENE算法进一步提出了改进的SAIGE-GENE+算法,并利用该方...
(可选)用于构建完整遗传关系矩阵(GRM)和估计方差比的基因型 文件 SAIGE 采用基因型的 PLINK 二进制文件,并假设文件前缀与 .bed, .bim 的文件前缀相同。和 .fam 代码语言:javascript 代码运行次数:0 运行 AI代码解释 ./input/nfam_100_nindep_0_step1_includeMoreRareVariants_poly.bed./input/nfam_100_ninde...
Wei Zhougrid.32224.350000 0004 0386 9924Analytic and Translational Genetics UnitMassachusetts General Hospital Boston MA USAWenjian Bigrid.11135.370000 0001 2256 9319Department of Medical GeneticsSchool of Basic Medical Sciences, Peking University Beijing ChinaZhangchen Zhao...
Maiken B. Elvestad, Brooke Wolford, Maoxuan Lin, Kristian Hveem, Hyun Min Kang, Goncalo R. Abecasis, Cristen J. Willer*, Seunggeun Lee* “Efficiently controlling for case-control imbalance and sample relatedness in large-scale genetic association studies.” Nature Genetics 50, 1335–1341 (2018...
如果您对SAIGE有任何疑问,请联系 saige.genetics@gmail.com 框架图 安装 如何安装和运行 SAIGE 和 SAIGE-GENE 安装SAIGE/SAIGE-GENE(当前版本 1.0.0(更新于 2022 年 3 月 15 日)) 依赖项列表: R >= 3.6.1, gcc >= 5.4.0, cmake 3.14.1, cget[1], savvy[2] R包: Rcpp (>= 1.0.7), RcppAr...
Maiken B. Elvestad, Brooke Wolford, Maoxuan Lin, Kristian Hveem, Hyun Min Kang, Goncalo R. Abecasis, Cristen J. Willer*, Seunggeun Lee* “Efficiently controlling for case-control imbalance and sample relatedness in large-scale genetic association studies.” Nature Genetics 50, 1335–1341 (2018...