High-throughput physical map anchor- ing via BAC-pool sequencing. BMC Plant Biol. 2015;15(1):99.Cvicova, K. et al. High-throughput physical map anchoring via BAC-pool sequencing. BMC Plant Biol. 15, 99 (2015).Cvikova K, Cattonaro F, Alaux M, Stein N, Mayer KF, Dolezel J, et ...
BAC-Pool Sequencing and Analysis of Large Segments of A12 and D12 Homoeologous Chromosomes in Upland Cotton.doi:10.1371/journal.pone.0076757Research ArticleAlthough new and emerging next-generation sequencing (NGS) technologies have reduced sequencing costs significantly, much work remains to implement ...
www.nature.com/scientificreports OPEN BAC-pool sequencing and analysis confirms growth-associated QTLs in the Asian seabass genome received: 23 November 2015 accepted: 19 October 2016 Published: 08 November 2016 Xueyan Shen1, Si Yan Ngoh1,2, Natascha May Thevasagayam1, Sai Rama...
We performed a pooled sequencing (pool-seq) of the genomes of 100Plasmodium falciparumisolates from Nigeria. We explored allele-frequency based neutrality test (Tajima's D) and integrated haplotype score (iHS) to identify genes under selection. Fourteen shared iHS regions that had at least 2 ...
Lynch M, Bost D, Wilson S, Maruki T, Harrison S. Population-genetic inference from pooled- sequencing data. Genome biology and evolution. 2014; 6:1210-1218.10.1093/gbe/evu085 [PubMed: 24787620]Lynch M, Bost D, Wilson S, Maruki T, Harrison S. 2014. Population-genetic inference from ...
Generic POLCAProduction controlSimulationOrder release based on Workload Control (WLC) is an important instrument to achieve short and predictable flow times and thus to improve the delivery performance of make-to-order enterprises. In this paper, we report a simulation study on the role of order...
Step-by-step instructions on how to conduct pooled-DNA sequencing experiments and data analyses are described in this chapter. 展开 关键词: Next-generation sequencing NGS Rare variants Alzheimer’s disease Pooled-DNA sequencing DOI: 10.1007/978-1-4939-2627-5_18 ...
fishes Article SNP Development in Penaeus vannamei via Next-Generation Sequencing and DNA Pool Sequencing Yongyu Huang 1, Lili Zhang 1, Hui Ge 2, Guodong Wang 1,*, Shiyu Huang 1 and Zhangwu Yang 2,* 1 Key Laboratory of Healthy Mariculture for the East China Sea, Ministry of Agriculture, ...
However, several key issues need to be addressed for pooled NGS. One of them is the high sequencing error rate and its high variability across genomic positions and experiment runs, which, if not well considered in the experimental design and analysis, could lead to either inflated false ...
The Immunochip platform tested 1535 variants covered in our targeted sequencing, for which a comparison was possible between the two platforms. AFs obtained from Pool-seq show an excellent correlation (R2 = 0.987) with AFs obtained from individual genotyping, with majority of the AF-pairs (...