Warning message:程辑包‘Seurat’是用R版本4.0.3来建造的>library(ggplot2)>library(infercnv)Warning message:程辑包‘infercnv’是用R版本4.0.3来建造的>expFile='expFile.txt'>groupFiles='groupFiles.txt'>geneFile='geneFile.txt'>infercnv_obj=CreateInfercnvObject(raw_counts_matrix=expFile,+annotations_...
(infercnv_obj = infercnv_obj, ref_data = ref_data_t,: Error Calls: <Anonymous> -> plot_cnv -> .plot_cnv_references 5: (function () traceback(2))() 4: stop("Error") 3: .plot_cnv_references(infercnv_obj = infercnv_obj, ref_data = ref_data_t, ref_groups = ref_groups, name...
infercnv_object <- infercnv::run(infercnvobj, cutoff=0.1, out_dir="/Users/victoria/Desktop/SingleCellAnalysis/Multiome", cluster_by_groups=TRUE, denoise=TRUE, HMM=FALSE, num_threads=2, analysis_mode="samples", no_plot=FALSE) INFO [2023-06-16 10:27:04] ::process_data:Sta...