`data`参数是plot_cell_trajectory函数的必需参数,它表示一个包含细胞状态信息的数据集。数据集应该是一个二维数组或数据帧,其中每行表示一个细胞的状态,每列包含各个状态的数值信息。数据集中必须至少包含x和y坐标的数据。 3.2 x和y `x`和`y`参数指定细胞轨迹图中细胞的位置。它们需要指定一个与`data`数据集中...
1. 从trajectory图中提取数据 p2$layers[[1]]$data > p2<-plot_cell_trajectory(object_used_monocle2.cds,cell_size=1,color_by="seurat_clusters",show_tree=T)>p2 '#示例一 > head(p2$layers[[1]]$data) source target source_prin_graph_dim_1 source_prin_graph_dim_2 target_prin_graph_dim_...
1.The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells 2.Single-cell mRNA quantification and differential analysis with Census 3.Reversed graph embedding resolves complex single-cell trajectories 4.The single-cell transcriptional landscape of mammalian ...
plot_complex_cell_trajectory.Rd plot_genes_branched_heatmap.Rd plot_genes_branched_pseudotime.Rd plot_genes_in_pseudotime.Rd plot_genes_jitter.Rd plot_genes_positive_cells.Rd plot_genes_violin.Rd plot_multiple_branches_heatmap.Rd plot_multiple_branches_pseudotime.Rd ...