Here we reveal, for the first time, the plasma membrane proteome of Triticum aestivum seedling roots in response to phenanthrene (a model PAH) exposure. Two-dimensional gel electrophoresis (2-DE) coupled with MALDI-TOF/TOF-MS and protein database search engines were employed to analyze and ...
As a paradigm for such complexity, the plasma membrane (PM) exhibits dynamic mosaicity at nanoscale, which is determined by an intricate interplay of membrane protein and lipid interactions in the context of underlying cortical actin cytoskeleton2,3,4,5,6,7. The function of membrane proteins in...
Ninety-three of those (64%) were membrane proteins, and 49 (34%) were plasma membrane proteins. A combined literature and database search for all 506 identified proteins revealed subcellular information on 472 proteins, of which 197 (42%) were plasma membrane proteins. These comprised numerous ...
The protein length of wild-type or mutated WRKY8 and WRKY28 is indicated in the parenthesis. b,c, wrky8-c3 wrky28-c2 double mutant plants are more susceptible to V. dahliae infection. Disease severity in each datapoint was quantified by qPCR-based quantification of fungal biomass in pooled...
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Composition of the peptide fraction in human blood plasma: database of circulating human peptides. fragments to their precursor proteins and the analysis of their cleavage sites revealed that there are different processing pathways of plasma proteins in ... R Richter,P Schulz-Knappe,M Schrader,.....
The remaining data are available within the Article and Supplementary Information. NCBI human Refseq protein database could be accessed at https://www.ncbi.nlm.nih.gov/refseq/. Source data are provided with this paper. Code availability This study did not generate custom computer code. No ...
Protein probabilities were assigned by the Protein Prophet algorithm [43]. Mass spectra have been deposited in the PRIDE database [44] under accession number 22842. Gene ontology The horse genome, although sequenced, is partially annotated; human orthologs of the equine proteins were therefore used...
, therefore, are more easily identified and quantified in semen by mass spectrometry and other techniques. These methods have enabled elaboration of the composition of the seminal plasma proteome and the tissue specificity of seminal plasma proteins. Strategies have been developed to discover protein ...
The STRING database in 2023: protein-protein association networks and functional enrichment analyses for any sequenced genome of interest. Nucleic Acids Res. 2023;51:D638–46. Article CAS PubMed Google Scholar Emoto T, Yamamoto H, Yamashita T, Takaya T, Sawada T, Takeda S, et al. Single...