PlantMarkers is a genetic marker database that contains a comprehensive pool of predicted molecular markers. We have adopted contemporary techniques to identify putative single nucleotide polymorphism (SNP), simple sequence repeat (SSR) and conserved orthologue set markers. A systematic approach to ...
DNA markerPGDBjA portal website that integrates a variety of information related to genomes of model and crop plants from databases (DBs) and the literature was generated. This website, named the Plant Genome DataBase Japan (PGDBj, http://pgdbj. jp/en/ ), is comprised of three component...
The Plant Genome DataBase Japan (PGDBj, http://pgdbj.jp/?ln=en) is a portal website that aims to integrate plant genome-related information from databases (DBs) and the literature. The PGDBj is comprised of three component DBs and a cross-search engine, which provides a seamless search...
"ggpubr","RColorBrewer","patchwork","lsa","viridis","hrbrthemes","circlize","chorddiag","ggplotify","data.table","parmigene","infotheo","igraph","cowplot","grid","dplyr"))##Installs devtools and the PlantPhoneDB CRAN dependancies...
CONSTITUTION:A promoter which can be expressed in a plant cell is bonded functionally with a structural gene capable of selecting the plant cell and the Poly(A) adhesion region to obtain a selective marker gene. A shuttle vector containing said gene, the boundary region of T-DNA of wild-...
植物的单细胞亚群是非常缺乏成熟的标记基因的,这个scPlantDB——探索植物细胞类型和标记基因的综合数据库,试图弥补这一点。网站:https://biobigdata.nju.edu.cn/scplantdb 文章收集了来自 17 个物种的 67 个 scRNA-seq 数据集的总共 2,546,778 个细胞,这些数据集采用七种不同的 scRNA-seq 技术(其中超过80%...
The MCScanX [27] software was then employed with default parameters to determine the synteny blocks and homologous gene pairs from the BLASTP results. Marker data The Krait tool [28] was used to mine simple sequence repeat (SSR) resources in nine pear genome data. A total of 386,779 SSR ...
A computational method called Ortho-Marker Gene Groups (OMGs) was developed to enable cell-type identification and comparison across plant single cell data. The OMG method revealed 14 conserved cell-type groups and is accessible via the OMG browser. ...
Naturally occurring variation among wild relatives of cultivated crops is an under-exploited resource in plant breeding. Here, I argue that exotic libraries, which consist of marker-defined genomic regions taken from wild species and introgressed onto th
Following the production of transgenic plants, the selectable marker gene(s) used in the process are redundant, and their retention may be undesirable. The