coli and Shigella, despite being closely related to enterohemorrhagic E. coli in the phylogenetic tree. In addition, our phylogenetic tree of Ipomoea species based on pentamer frequency in chloroplast genomes was correlated with previously reported morphological similarities. Fur...
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Among other things,Computational Molecular Biology deals with processing genetic sequences.Considering the evolutionary relationship of two sequences, we can say thatthey are closely related if they do not differ very much. We might representthe relationship by a tree, putting sequences from ancestors...
UniFrac distance is computed by calculating the fraction of branch lengths of a combined phylogenetic tree that are not shared between two communities19. Thus, two communities that mostly have members of phylogenetically distinct clades would have large a UF distance, whereas communities that consist ...
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Such stretches permit evaluation of the divergence between closely related species and even between varieties within a species. The phylogenetic tree computed ... J Guadet,J Julien,JF Lafay,... - 《Molecular Biology & Evolution》 被引量: 658发表: 0年 Phylogenetic position of Riemerella anatipes...
2The discovery of archaea: puzzle-solving normal science unpredictably heralded restructuring of the phylogenetic tree This paper contemplates the history and philosophical implications of the discovery by Carl Woese in the 1970s of archaea, a third domain of the phylogenetic tree. This discovery led ...
Using a null model that maintained observed species frequencies in null communities, the average phylogenetic structure of tree communities in the FDP was close to random at all spatial scales examined, but more quadrats than expected contained species that were phylogenetically clustered or over...
Phylogenetic tree constructed using Maximum Likelihood (ML) method based on SNPs of 19 Paeoniaceae species. Red numbers at nodes are values for bootstrap support. Among the 14 highly variable regions,matKappeared suitable for phylogenetic analysis of the species of sect.Paeonia, which was consisten...
TreeKO:a duplication-aware algorithm for the comparison of phylogenetic trees Comparisons of tree topologies provide relevant information in evolutionary studies. Most existing methods share the drawback of requiring a complete and e... Marcet-Houben,M,Gabaldon,... - 《Nucleic Acids Research》 被引...