Dockerfile Add classify-consensus-blast multithreading Nov 24, 2023 LICENSE Create LICENSE Apr 17, 2021 README.md Add citation Apr 24, 2024 TaxonomyTsv_from_fastaNCBI.R Improve TaxonomyTsv_from_fastaNCBI.R script Jul 13, 2023 Zymo-GridION-EVEN-BB-SN_sup_pass_filtered_27F_1492Rw_1000_reads....
dockerfiles docs notebooks src test/ref .readthedocs.yaml LICENSE README.md run Repository files navigation README MIT license modPhred modPhred is a pipeline for detection, annotation and visualisation of DNA/RNA modifications from raw ONT data. The pipeline consists of four steps /...
3、输入文件需要带event信息的fast5文件和对应的fastq文件,我们原始的fast5是不带event信息的,需要重新进行basecalling。用Albacore或者guppy均可,albacore用上面deepmod里面说的docker程序运行,guppy的话可以下载安装,用guppy进行basecalling $ guppy_basecaller-i single_fast5-s single_fast5-c dna_r9.4.1_450bps...