Total number of reads for each treatment sample, as obtained by Illumina sequencing.Yiqing, LiuYusong, JiangJianbin, LanYong, ZouJunping, Gao
Sample an approximate number of reads from a fastq file without reading the entire file - mdshw5/strandex
Pyro-Align: Sample-Align based Multiple Alignment system for Pyrosequencing Reads of Large Number 来自 Semantic Scholar 喜欢 0 阅读量: 31 作者: F Saeed 摘要: Pyro-Align is a multiple alignment program specifically designed for pyrosequencing reads of huge number. Multiple sequence alignment is shown...
Assuming that the sequence process is uniform, read depth follows a random (typically Poisson or modified Poisson) distribution [13] and the number of reads mapping to a genomic region is expected to be proportional to the ploidy that the region appears in the sequence sample. Compared with ...
To identify potential CNVs the pipeline utilizes coverage depth information of reads in target regions defined by the gene panel. If a target region has CNV, the coverage depth in this region will differ from the expected coverage depth. When duplicated, the target region will have 1.5 times ...
gc_and_sample_size_normalise <- function(info, coverages, averageCoverage=F, allowedChroms=NULL) in the filegeneralHelpers.R. Note3:on-target and off-target reads should be pre-processed in.covformats. If you do not have off-target reads for some samples - don't worry, ClinCNV will ...
Finally, every segment is assigned to the state gain, loss, or normal copy number. To do that, epiAneufinder calculates the trimmed-average number of reads per identified segment, defined as the average number of reads per bin in every segment without the lowest 0.1 and highest 0.1 quantile...
Wheat (Triticum aestivum L.) is a major staple food for more than one-third of the world’s population. Tiller number is an important agronomic trait in wheat, but only few related genes have been cloned. Here, we isolate a wheat mutant, tiller number1 (
a恐龙是一种体型巨大的东西 The dinosaur is one kind of build giant thing[translate] a读法语比说法语简单 Reads French to speak French to be simpler than[translate] a树,在我们生活中随处可见,这说明树是与我们生活息息相关的、必不可少的。树是一种重要的自然资源,我们生活中时刻用到的纸张就是用树...
'hour_of_day': 12, 'sample_interval_in_ms_for_this_trace': 2000, 'number_of_samples_in_this_trace': 16000, 'taper_type': 0, 'x_coordinate_of_ensemble_position_of_this_trace': 0, 'gap_size': 0, 'geophone_group_number_of_trace_number_one': 0, 'low_cut_slope': 0, 'coordina...