nonredundant (ˌnɒnrɪˈdʌndənt) adj not redundant Collins English Dictionary – Complete and Unabridged, 12th Edition 2014 © HarperCollins Publishers 1991, 1994, 1998, 2000, 2003, 2006, 2007, 2009, 2011, 2014 Want to thank TFD for its existence?Tell a friend about us, ad...
The M5nr: a novel non-redundant database containing protein sequences and annota- tions from multiple sources and associated tools. BMC Bioinf. 13, 141.Wilke A, Harrison T, Wilkening J et al. The M5nr: a novel non-redundant database containing protein sequences and annotations from ...
... 后血细胞大量聚集在一起形成结节(图 Fig 4.1 B 非冗 余蛋白质数据库( non-redundant protein databas…www.docin.com|基于2个网页 2. 蛋白质序列资料库 有8,867笔contigs可比对至NCBI 蛋白质序列资料库(non-redundant protein database)。利用MISA (MIcroSAtellite identification t…ir.lib.ncku.edu.tw|...
filtering step of all sequences with homology to non-redundant proteins (nr) annotated in the NCBI database85,86using BLASTx82(evalue ≤ 1e−6, strand = “plus”). For each remaining transcript, we identified the best blast hit against the ‘nr’ database with a percentage of...
The annotations of differentially expressed genes were performed by aligning against the non-redundant protein sequences (nr) database using BLASP (http://blast.st-va.ncbi.nlm.nih.gov/Blast.cgi?PROGRAM=blastp&PAGE_TYPE=BlastSearch&LINK_LOC=blasthome). Target site prediction for 30 ...
Analysis of presence of polyketide synthase (PKS) and nonribosomal polyketide synthesis (NRPS) was performed by discriminating the gene with a large size using a database realized in our laboratory; predicted proteins were compared against the nonredundant (nr) GenBank database using BLASTP and fin...
Domain sequence similarity searches were performed using PSI-BLAST program (Altschul et al., 1997) against the non-redundant (nr) database housed at the NCBI and the HHpred program (Zimmermann et al., 2018) against pfam and pdb databases (Finn et al., 2016, Burley et al., 2019). Struc...
Of the non-redundant OMBB structures in the Protein Data Bank, half have been solved during the past 5 years. This influx of information provides new ... JSG Slusky,RLD Jr - 《Bioinformatics》 被引量: 28发表: 2013年 The divergence entropy characterizing the internal force field in proteins ...
M. NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Res. 35, D61–D65 (2006). Google Scholar Mukherjee, S. et al. Genomes OnLine database (GOLD) v.7: updates and new features. Nucleic Acids Res. 47, D...
In addition, KEGG pathway analysis was conducted to determine the reaction networks of all identified DEPs using Blast2GO 4.0 against the non-redundant protein database (NR; NCBI) (http://www.geneontology.org/). Finally, protein-protein interactions were analyzed using the STRING v10 database ...