Maximum Likelihood (ML) phylogenetic tree showing the relationship of the new VHSV G-gene sequences (indicated in red) and other VHSV genotype representatives.Nina, SandlundBritt, GjersetØivind, BerghIngebjørg, ModahlNiels, Jørgen ...
The first formulation obtains a maximum likelihood estimate of the viral population given the observed paired-end reads. The second formulation obtains a minimal set of viral haplotypes retaining the phylogenetic information in the population. We evaluate our algorithm on simulated datasets varying on ...
Maximum Likelihood (ML) phylogenetic tree showing the relationship of the new VHSV G-gene sequences (indicated in red) and other VHSV genotype representati... S Nina,G Britt,Øivind, Bergh,... 被引量: 0发表: 2014年 Protective immunity to VHS in rainbow trout (Oncorhynchus mykiss, Walbaum...
Maximum likelihood (ML) is a popular method for inferring a phylogenetic tree of the evolutionary relationship of a set of taxa, from observed homologous aligned genetic sequences of the taxa. Generally, the computation of the ML tree is based on numerical methods, which in a few cases, are...
Maximum likelihood phylogenetic tree based on COI gene sequences.Régis, Vivien
求翻译:A phylogenetic tree constructed by the maximum likelihood是什么意思?待解决 悬赏分:1 - 离问题结束还有 A phylogenetic tree constructed by the maximum likelihood问题补充:匿名 2013-05-23 12:21:38 的最大似然构建的系统树 匿名 2013-05-23 12:23:18 一个建造phylogenetic树的最大可能性 ...
Maximum likelihood phylogenetic analyses based on both ITS and β-tubulin sequence data place P. mercuriale in a clade between Pythium and Phytophthora ... B Lassaad,McLeod Adèle,P Bernard,... - 《Fems Microbiology Letters》 被引量: 83发表: 2010年 Vacuolating Cytotoxin ( vacA ) Alleles of ...
Phylogenetic trees are essential for studying biology, but their reproducibility under identical parameter settings remains unexplored. Here, we find that 3515 (18.11%) IQ-TREE-inferred and 1813 (9.34%) RAxML-NG-inferred maximum likelihood (ML) gene trees are topologically irreproducible when executing...
PAML is a package of programs for phylogenetic analyses of DNA and protein sequences using maximum likelihood (ML). The package includes the following programs: BASEML, BASEMLG, CODEML, EVOLVER, PAMP, YN00, MCMCTREE, and CHI2. Tree-search algorithms implemented in BASEML and CODEML are primit...
Genetic Algorithm-Based Maximum-Likelihood Analysis for Molecular Phylogeny A heuristic approach to search for the maximum-likelihood (ML) phylogenetic tree based on a genetic algorithm (GA) has been developed. It outputs the best ... K Katoh,KI Kuma,T Miyata - 《Journal of Molecular Evolution》...