而且以不同的方式对数据库进行排序,也会导致在将max_target_seqs参数设置为1时,BLAST返回不同的“top hit”。原文如下: To enable the efficient processing of large data sets, researchers frequently rely on shortcuts aimed at reducing the number of BLAST results that need to be processed. A common s...
4.2.720 max_target_seqs: Maximum number of aligned sequences to keep from the BLAST database. 4.2.21 negative_gilist: File containing a list of GIs to exclude from the BLAST database. B L 4.2.22 num_alignments: Number of alignments to show in the BLAST output. A S T 4.2.23 num...
另一个问题：在我们的测试中，推测性解码比纯原模型慢。
apiVersion: ray.io/v1 kind: RayService metadata: name: text2sql spec: serveConfigV2: | applications: - name: text2sql route_prefix: / import_path: serve:model deployments: - name: VLLMDeployment max_ongoing_requests: 100 autoscaling_config: target_ongoing_requests: 1 min_replicas: 1 max...
if word not in word_to_ix: word_to_ix[word] = count1 word_count += 1 for tag in tags: if tag not in tag_to_ix: tag_to_ix[tag] = count2 tag_count += 1 return word_to_ix, tag_to_ix word_to_ix, tag_to_ix = seqs_to_dictionary(training_data) print(word_to_ix) print...
(clust.getNumberOfSeqs()); } samples.add(s); } processSamples(samples, statCalcs, resultDir, cutoff.getCutoff() + "_", plotter); } } finally { parser.close(); } } else { List<Sample> samples = new ArrayList(); BufferedReader reader = new BufferedReader(new FileReader(inputFile))...
self.watcher_first_run =Falseself.watcher.start()@pydio_profiledefupdate_min_seqs_from_store(self, success=False):self.local_seq = self.current_store.get_min_seq('local', success=success)ifself.local_seq ==-1: self.local_seq = self.local_target_seq ...
BLASTN参数研究记之max_hsps 最近频繁使用到BLASTN,BLASTN有很多参数。有一些显而易见的参数,例如: -query -out -outfmt -db 也有一些参数不那么常用,今...