data.dir=".\\outs_onlyhires_h5\\"T2<-Load10X_Spatial_change(data.dir=data.dir,filename="filtered_feature_bc_matrix.h5",#slice="sli",image.name="tissue_hires_image.png")for(iincolnames((T2@images[[1]]@coordinates))){T2@images[[1]]@coordinates[[i]]<-as.integer(T2@images[[1]]@...
后台回复 “函数” 既可以获取Load10X_Spatial_change.R 和 测试数据文件。第二部分为空转的Seurat标准分析流程,重点介绍了和单细胞转录组的差异。 一Load10X_Spatial_change函数测试 加载R包和数,然后使用不用场景进行测试。 library(Seurat) library(jsonlite) library(png) library(tidyverse) library(ggpubr) l...
data.dir = ".\\outs_onlyhires_h5\\"T2 <- Load10X_Spatial_change(data.dir = data.dir,filename = "filtered_feature_bc_matrix.h5",#slice = "sli",image.name = "tissue_hires_image.png")for (i in colnames((T2@images[[1]]@coordinates))) {T2@images[[1]]@coordinates[[i]] <- as...
data.dir = ".\\outs_onlyhires_h5\\"T2 <- Load10X_Spatial_change(data.dir = data.dir,filename = "filtered_feature_bc_matrix.h5",#slice = "sli",image.name = "tissue_hires_image.png")for (i in colnames((T2@images[[1]]@coordinates))) {T2@images[[1]]@coordinates[[i]] <- as...