git clone https://github.com/hewm2008/LDBlockShow.git cd LDBlockShow ; chmod 755 configure ; ./configure; make; mv LDBlockShow bin/; # [rm *.o] Note: If failed to link,try to re-install the libraries zlibOption 2:tar -zxvf LDBlockShowXXX.tar.gz cd LDBlockShowXXX; cd src; ...
LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files - LDBlockShow/config.status at master · wangpanqiao/LDBlockShow
最近需要画LD block,之前一直用haploview软件画,haploview软件毛病比较多,比如不能有多态位点,输入的变异位点不能太多等。动不动就报错。 最近试了一下另外一个画LD block的软件LDBlockShow,比haploview好用许多。不需要自己剔除多态位点,直接输入vcf文件即可,简直就是心头好。 直接下载安装: wget https://github.com...
动不动就报错。 最近试了一下另外一个画LD block的软件LDBlockShow,比haploview好用许多。不需要自己剔除多态位点,直接输入vcf文件即可,简直就是心头好。 直接下载安装: wget https://github.com/BGI-shenzhen/LDBlockShow/archive/v1.33.tar.gz tar -zxvf v1.33.tar.gzcdLDBlockShow-1.33/src/ sh make.shcd...
以上就是关于LDBlockshow使用的简单示例,更多内容请查看官方帮助文档。 参考资料: https://github.com/hewm2008/LDBlockShow/blob/main/LDBlockShow_Manual_Chinese.pdf https://blog.csdn.net/yijiaobani/article/details/127498536 https://anaconda.org/bioconda/ldblockshow...
wget https://github.com/BGI-shenzhen/LDBlockShow/archive/v1.33.tar.gz tar -zxvf v1.33.tar.gz cd LDBlockShow-1.33/src/ sh make.sh cd ../bin/ 画LD图: LDBlockShow -InVCF 1000genomes.vcf.gz -OutPut file -Region chr11:2142000:2342000 -OutPdf ...
https://github.com/hewm2008/LDBlockShow/blob/main/LDBlockShow_Manual_Chinese.pdf https://blog.csdn.net/yijiaobani/article/details/127498536https://anaconda.org/bioconda/ldblockshow mdnice 扫码安装简书客户端 畅享全文阅读体验 扫码后在手机中选择通过第三方浏览器下载...
git clone https://github.com/hewm2008/LDBlockShow.git cd LDBlockShow ; chmod 755 configure ; ./configure; make; mv LDBlockShow bin/; # [rm *.o] Note: If failed to link,try to re-install the libraries zlibOption 2:tar -zxvf LDBlockShowXXX.tar.gz cd LDBlockShowXXX; cd src; ...
Breadcrumbs LDBlockShow / config.h.inTop File metadata and controls Code Blame 96 lines (65 loc) · 2.46 KB Raw /* config.h.in. Generated from configure.ac by autoheader. */ /* Define to 1 if you have the <inttypes.h> header file. */ #undef HAVE_INTTYPES_H /* Define to 1 if...
git clone https://github.com/BGI-shenzhen/LDBlockShow.git chmod 755 configure; ./configure; make; mv LDBlockShow bin/; # [rm *.o] 2) tar -zxvf LDBlockShowXXX.tar.gz cd LDBlockShowXXX; cd src; sh make.sh # or in Linux: make ; make clean ...