Upgrade Bioconductor to the latest version available for this version of RbiocLite
Summary: OneChannelGUI is an add-on Bioconductor package providing a new set of functions extending the capability of the affylmGUI package. This library provides a graphical interface (GUI) for Bioconductor libraries to be used for qual... ...
- name: Setup R and Bioconductor uses: grimbough/bioc-actions/setup-bioc@v1 with: bioc-version: release bioc-version: devel - name: Install dependencies uses: r-lib/actions/setup-r-dependencies@v2 - name: Build, Install, Check 6 changes: 3 additions & 3 deletions 6 R/utils_groupcomparis...
For the TTR method: An R Bioconductor package, Maftools, was used to calculate the fraction of transversion and transition in each sample. TTR value was then defined as the transversion fraction divided by the transition fraction in each sample[2-3].Specifically, Maftools classified single nucleo...
* Since error occurs when I use the GitHub version of `ComplexHeatmap` to concatenate heatmaps, I replace the requirement for this package by using its Bioconductor version. * R package of `SNFtool` has been removed from the CRAN repository, I replaced this by using GitHub version (https:...