Loss of estrogen receptor-alpha expression is associated with hypermethylation near its ATG start codon in gastric can- cer cell lines. Oncol Rep 2004; 11: 617-22.Woo IS,Park MJ,Choi SW,et a1.Loss of estrogen receptor--alpha expression is associated with hypermethylation near its ATG start ...
domuncula NmeGp1 from -130 to -138 nucleotides (ATGTCTCAG). The structure of sponge NmeGp1 promoter regions is shown in Additional file 1. The Nme gene from A. queenslandica is 654 bp long from the ATG start codon to the TAG stop codon. It has four short introns with lengths of 47,...
MRP3alleles.aSchematic representation of the genomic region between 91,500 and 94,000 bp on scaffold 147. The intronless geneMRP3is represented as a thick arrow with the CDS in yellow and the UTR regions in orange, the transcription start site (TSS), the start codon (ATG) and the sto...
A genomic region downstream of the start codon (ATG) of Gpr176 was deleted. Grey box: probe used for Southern blot. (f) Southern blot of KpnI-digested DNA from Gpr176+/+, Gpr176+/− and Gpr176−/− mice. Genomic fragments from the wild-type (7.8 kb) and mutant (12.3...
Moreover, ACC nucleotides in front of ATG and substitution A for G just after the translational start codon ATG were introduced in order to provide the Kozak consensus sequence and a restriction site NcoI, respectively. The reverse primer for amplification of IL-11Rα contained an additional 5'...
5'-deletions in the EgCAD2 promoter were obtained by PCR amplification of the pOGUS-EgCAD2 plasmid containing the full-length 2.5 kb EgCAD2 promoter [51] with primers that introduced an EcoRI site at positions -301, -247, -203 and a NcoI site at the ATG start codon (additional file...
A yellow fruited tomato 1 (yft1) mutant (also named n3122) was shown, by map-based cloning, to have a genetic lesion comprising a 573 bp insertion and a 13 bp deletion in the promoter region (-318 bp upstream of the ATG start codon) of an EIN2 gene, and the fruit color segregati...
All dicots investigated, as well as the monocots Liliaceae and Aloaceae (11, 12), require editing to restore the ndhDAUG start codon from the cryptic start sequence ACG. Other monocots, such as Poaceae, have the correct ATG start codon and, therefore, do not require editing at this ...
The stop codon within exon 9 is also indicated (TGA, red arrow). (b) Three mRNA variants are generated. ATG1 forms OCLN variants 1 and 2, each of these two variants has a different transcriptional start site. ATG2 generates OCLN variant 3. (c) OCLN variant 1 and 2 translate into ...
The obtained full-length cDNA was 1675 bp in length, including a 176-bp 5′ untranslated region (UTR), a 1275-bp ORF, a 3-bp stop codon (TAA), and a 221-bp 3′UTR. The transcription start site (− 176-bp upstream from ATG) was located within the 114-bp InDel (Fig. 5a). ...