全面介绍HPA(Human Protein Atlas)数据库, 视频播放量 1188、弹幕量 0、点赞数 23、投硬币枚数 6、收藏人数 73、转发人数 8, 视频作者 生信交流平台, 作者简介 生信博士,分享生信技能。合作请联系:,相关视频:STRING寻找相互作用基因,WGCNA共表达网络—核心基因筛选,
Fig. 1. ITGB6 RNA expression in human normal tissue plotted as ratesper kilobasemillion (RPKM). Data were obtained from Human Protein Atlas Dataset available fromproteinatlas.org. 不仅可以直接使用,而且可以独立撑起一个figure。这数据库,我王多余学了。 THE HUMAN PROTEIN ATLAS,简称HPA,分为Cell,Tis...
而查阅RNA表达水平,HPA提供了三个转录组学数据,分别是HPA,GTEx,和Consensus。 CELL type Atlas:跟Tissue Atlas前面类似,存在general information, Human protein atlas information, single cell types以及single cell tissue。另外也可以查阅在细胞系中表达情况。 Pathology Atlas:前面类似,包含general information, Human ...
The Human Protein Atlas (HPA) Subcellular Section has generated the first subcellular proteome map of human cells, consisting of a publicly available dataset of 83,762 confocal microscopy images detailing the subcellular localization of 13,041 proteins (HPAv21)6 across a multitude of cell lines. Cl...
We have used a Convolutional Neural Network (CNN) model called GapNet-PL for the multi-label classification task on the Human Protein Atlas Classification (HPA) Dataset. Authors have found that the Parametric Rectified Linear Unit (PreLU) activation function is better than the ...
"HPA_Main_Location_2020":这部分表示线粒体相关蛋白质在2020年版的人类蛋白质图谱(Human Protein Atlas,HPA)中被归类到的主要位置。HPA是一个用于研究人类蛋白质表达和定位的资源,其中包括了蛋白质的组织和亚细胞定位信息。 "(Reliability)":这部分可能表示与这个位置分类相关的可靠性评估或置信度。通常,HPA会提供...
[赛前必读之一](https://www.kaggle.com/c/human-protein-atlas-image-classification/discussion/73938)。 数据中包含的图片(经过处理合并后)大概长这个样子(图挂了好像): Dataset 训练集 31072 张图,测试 11702 张图。Kaggle 上直接可下载的数据统一为 512 x 512 Grayscale 的图,每张图对应一个合成图(如...
HPA数据库概要(Human Protein Atlas) OHPA数据库概要(Human Protein Atlas) û收藏 转发 评论 ñ赞 评论 o p 同时转发到我的微博 按热度 按时间 正在加载,请稍候...查看更多 a 275关注 48粉丝 3463微博 微关系 他的关注(266) 宋威龙99 韩东君ElvisHan 小蜗周周_ ...
4zxxix,zxxx and Supplementary Table 17), and we validated these human-specific markers referring to the Human Protein Atlas (HPA)35,81,82,83 (Supplementary Fig. 8). In the brain NVU, mapping of our dataset to the freshly isolated mouse dataset70 revealed high transcriptomic similarity ...
a, Expression of CSTE (antibody: CAB032687, n = 3 biologically independent samples for each region) in gut histological sections from proteinatlas.org. Scale bar = 50 µm. b, UMAP visualization of BEST4 enterocytes in scRNA-seq dataset coloured by key marker BEST4/OTOP2 expression and ...