单细胞singleR注释参考图谱,可用于singleR的本地使用,有些朋友网络问题,可以直接使用这些内容点赞(0) 踩踩(0) 反馈 所需:1 积分 电信网络下载 创维8R74引导 RTD2644D-TV010-DTMB-LQFP176-DDR3-128MB-NAND-0x1-rsq.0010.0601.0001.zip 2025-02-19 18:50:05 积分:1 ...
Using'localHub=TRUE'If offline,please also see BiocManager vignette section on offline use Errorin.updateHubDB(hub_bfc,.class,url,proxy,localHub):Invalid Cache:sqlite file Hub has not been added to cache Run againwith'localHub=FALSE'In addition:Warning message:HumanPrimaryCellAtlasData不再有用...
SingleR comes packaged with two comprehensive human reference data sets: a data set comprising data from the Blueprint (Fernández et al., 2016) and ENCODE (Sloan et al., 2016) projects and a reference set from the Human Primary Cell Atlas (Mabbott et al., 2013). We also built a ...
(https://www.ebi.ac.uk/biostudies/arrayexpress/). The reads were aligned to the reference genome GRCh38 (hg38) and analyzed by Seurat as mentioned above. However, Human Primary Cell Atlas (HPCA) data were used as a reference for cell type annotation. The lung cancer single-cell dataset ...
dependent cell death, is lipid peroxidation induced by oxidative stress. The primary cause of ferroptosis is the build-up of ROS, which leads to lipid peroxidation and exceeds the redox levels of glutathione (GSH) and GPX4. This disrupts cell membrane integrity and ultimately triggers cell death...
N. Mitochondria: Their role in ganglion cell death and survival in primary open angle glaucoma. Expl Eye Res 90, 750–757, doi: 10.1016/j.exer (2010). 65. Nuskova, H. et al. Mitochondrial ATP synthasome: Expression and structural interaction of its components. Biochem Biophys Res Commun ...
The primary data (gene-cell expression matrix and peak-cell accessibility matrix) and the processed upstream results (R rds file) were deposited on figshare repository, with share links: https://figshare.com/s/61db5dc9030e6363267e for 8w_atac, https://figshare.com/s/ccec028e5a3ec5b20106...
We found that H19 and miR-675 expression enhances breast cancer cell migration [33,58]. This could be mediated by targeting the above cited molecules, even if miRNAs targets remain tissue specific. By example, miR-675 was shown to downregulate the expression of RB in human colorectal cancer...