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htseq-count error, Could not retrieve index file htseq/htseq#28 Closed Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment Assignees No one assigned Labels None yet Projects None yet Milestone No milestone Development No branches or pull...
wget https://github.com/arq5x/bedtools2/releases/download/v2.26.0/bedtools-2.26.0.tar.gz tarzxvf bedtools-2.26.0.tar.gz 使用 1 bedtools multicov -bams 1.bam 2.bam 3.bam 4.bam-bedfile.bed >read.count.txt 1 2 3 4 5 # 注意,此处的bed文件需要自己处理得到的,需要四列,第一列为chr...
1.https://htseq.readthedocs.io/en/master/count.html 2.https://github.com/htseq/htseq/releases
和featurecounts一样,htseq-count也是一款进行raw count定量的软件。该软件采用python语言进行开发,集成在HTseq这个包中。 对于python的包,通过pip可以方便的进行安装,代码如下 代码语言:javascript 代码运行次数:0 复制 Cloud Studio代码运行 pip install HTSeq ...