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wget https://github.com/arq5x/bedtools2/releases/download/v2.26.0/bedtools-2.26.0.tar.gz tarzxvf bedtools-2.26.0.tar.gz 使用 1 bedtools multicov -bams 1.bam 2.bam 3.bam 4.bam-bedfile.bed >read.count.txt 1 2 3 4 5 # 注意,此处的bed文件需要自己处理得到的,需要四列,第一列为chr...
1.https://htseq.readthedocs.io/en/master/count.html 2.https://github.com/htseq/htseq/releases
和featurecounts一样,htseq-count也是一款进行raw count定量的软件。该软件采用python语言进行开发,集成在HTseq这个包中。 对于python的包,通过pip可以方便的进行安装,代码如下 代码语言:javascript 代码运行次数:0 复制 Cloud Studio代码运行 pip install HTSeq HTSeq提供了许多处理NGS数据的功能,htseq-count只是其中进行...