ls *1.clean.fq.gz|while read id; do hisat2 -t -p 16 -x /work/home/acwnw4bl7y/GRCm39/GRCm39 \ -1 $id -2 ${id%_*}_2.clean.fq.gz \ 2>${id%%_*}.hisat2.log \ |samtools sort -@ 16 -o ${id%_*}_ht2p.bam done srun:ROUTE:split_hostlist:hl=c09r3n13 tree_width0...