gtdbtk check_install [2023-08-3116:01:13]INFO:GTDB-Tkv2.3.2[2023-08-3116:01:13]INFO:gtdbtk check_install[2023-08-3116:01:13]INFO:UsingGTDB-Tkreference data version r214:/hwfsxx1/ST_HN/P18Z10200N0423/huty/databases/GTDB_214.1/release214[2023-08-3116:01:13]INFO:Runninginstall verificat...
check_install:检查数据库文件是否存在且位置正确 测试流程test 检查数据库,结果显示OK和Done表示正常 gtdbtk check_install 正常显示如下: GTDB-Tk v1.3.0 gtdbtk check_install Using GTDB-Tk reference data version r95: meta/db/gtdb/release95/ Running install verification Checking /home/meta/db/gtdb/release...
check_installnow does an exhaustive check of the reference data. Resolved an issue where gene calling would fail for low quality genomes (#192). Improved FastANI multiprocessing performance. Third party software versions are reported where possible. ...
Expand Down Expand Up @@ -220,8 +220,8 @@ def check_install(self): ok = True # Compute the hash for each directory self.logger.info(f'Checking integrity of reference package: {Config.GENERIC_PATH}') for obj_path, expected_hash in Config.REF_HASHES.items(): self.logger.info(f'Che...