gt_gtf_to_gff3_test_inconsistent_strand2.gtf Go to file Cannot retrieve contributors at this time 52 lines (52 sloc) 6.68 KB Raw Blame chr1 unknown exon 11874 12227 . + . gene_id "DDX11L1"; gene_name "DDX11L1"; transcript_id "NR_046018"; tss_id "TSS14844"; chr1 unk...
-L 将Ensembl GTF 转换为 GFF3 conversion (implies -F; should be used with -m) -o 输出"filtered" 后的GFF文件 。 -T -o 参数将输出 GTF格式。 5. pygtftk 为什么网上没有这个包的资料...总之翻译了一下官网的话.Python GTF 工具包 (pygtftk) 包旨在简化 GTF/GFF2.0 文件(基因传输格式...
ThePython GTF toolkit (pygtftk) packageis intended to ease handling of GTF/GFF2.0 files (Gene Transfer Format). It currently does not support GFF3 file format. The pygtftk package is compatible with Python 3.9 and relies onlibgtftk, a library of functionswritten in C. ...
genomediff•gff3•gff3_to_gtf•gff3validator•gtf_to_gff3•hop•id_to_md5•inlineseq_add•inlineseq_split•interfeat•loccheck•ltrclustering•ltrdigest•ltrharvest•matchtool•matstat•md5_to_id•merge•mergefeat•mgth•mkfeatureindex•mkfmindex•mmapandread...