generative-model diffusion-models conditional-generation score-matching graph-generative-model Updated Nov 5, 2024 Python zeno129 / DYANE Star 2 Code Issues Pull requests DYnamic Attributed Node rolEs (DYANE) is an attributed dynamic-network generative model based on temporal motifs and attributed ...
In this study, we present MatterGen, a diffusion-based generative model that generates stable, diverse inorganic materials across the periodic table and can be fine-tuned towards a wide range of downstream tasks for inverse materials design (Fig.1). To enable this, we introduce a diffusion proc...
Learning to solve PDE-constrained inverse problems with graph networks. Proc. 39th International Conference on Machine Learning Vol. 162, 26895–26910 (PMLR, 2022). Tang, M., Liu, Y. & Durlofsky, L. J. A deep-learning-based surrogate model for data assimilation in dynamic subsurface flow ...
ModelΔCoordinate/atoma Σ(ΔPairwise)/atomb GAN 9.62 × 10−2 3.84 WGAN 1.37 × 10−2 2.49 Diffusion 5.51 × 10−4 4.73 × 10−1 a The difference between the “absolute” x, y, and z values predicted and the “relative” position predicted by the direction graph. b The sum...
TheGraph of Thoughtmodel stands out for its ability to handle high-complexity tasks involving ...
Acknowledgement: Our implementation is based on the repo Score_SDE. Evaluation implementation is modified from the repo GGM-metrics.About Implementation for the paper: GraphGDP: Generative Diffusion Processes for Permutation Invariant Graph Generation Topics graph-generation diffusion-models Resources Read...
We introduce an equivariant diffusion-based generative model that learns the joint distribution of ligand and protein conformations conditioned on the molecular graph of a ligand and the sequence representation of a protein extracted from a pre-trained protein language model. Benchmark results show that...
SurfDock employs a generative diffusion model on a non-Euclidean manifold, optimizing molecular translations, rotations and torsions to generate reliable binding poses. Our extensive evaluations across various benchmarks demonstrate SurfDock’s superiority over existing methods in docking success rates and...
In essence, diffusion models offer a unique perspective on generative modeling, emphasizing gradual refinement and transformation of data, which often results in high-quality generated samples. Transformer-based Generative Models Transformer-based models have revolutionized the field of deep learning, particu...
Diffusion kernels on graphs and other discrete structures. In Proc. 19th International Conference on Machine Learning, 315–322 (2002) . Satorras, V. G., Hoogeboom, E. & Welling, M. E(n) equivariant graph neural networks. In Proceedings of the 38th International Conference on Machine ...