Conservation of gene co-regulation in prokaryotes and eukaryotes We raise some issues in detecting the conservation (or absence thereof) of co-regulation using gene order; how we think the variations in the cellular netw... B Snel,P Bork,MA Huynen - 《Trends in Biotechnology》 被引量: 236发...
Teichmann SA and Madan Babu M (2002) Conservation of gene co-regulation in prokaryotes and eukaryotes. Trends in Biotechnology, 20, 407-410, discussion 410.Teichmann SA, Babu MM, Conservation of gene co-regulation in prokaryotes and eukaryotes, TRENDS Biotechnol 20:407-410, 2002....
Model of the operon and its relation to the regulator gene. Experiments have shown that many of the genes within the cells of organisms are inactive much or even all of the time. Thus, at any time, in both eukaryotes and prokaryotes, it seems that a gene can be switched on or off. ...
Selfish operons: the evolutionary impact of gene clustering in prokaryotes and eukaryotes. Curr. Opin. Genet. Dev. 9, 642–648 (1999). 15. Ballouz, S., Francis, A. R., Lan, R. & Tanaka, M. M. Conditions for the evolution of gene clusters in bacterial genomes. PLoS Comput. Biol....
Struhl, K. Fundamentally different logic of gene regulation in eukaryotes and prokaryotes.Cell98, 1–4 (1999). ArticleCASPubMedGoogle Scholar Yuh, C. H., Bolouri, H. & Davidson, E. H. Genomic cis-regulatory logic: experimental and computational analysis of a sea urchin gene.Science279, 18...
Selfish operons: the evolutionary impact of gene clustering in prokaryotes and eukaryotes JeffreyLawrence, inCurrent Opinion in Genetics & Development, 1999 In contrast,gene clusterswere found to be the rule rather than the exception in bacterial taxa. The genes required forbiosynthesisof manyamino ac...
Subtilisin-like proteases (SLPs) are ubiquitous in prokaryotes and eukaryotes. Six families of SLPs have been identified [3]: subtilisins, proteinase K-type, thermitases, kexins, lantibiotic peptidases and pyrolysins. Phylogenomic analyses suggest three families of subtilisin-like proteases are present...
partial : allows prediction of incomplete genes at the sequence boundaries (default) intronless : predicts only single-exon genes like in prokaryotes and some eukaryotes complete : predicts only complete genes Output type:Specify whether the output sequences will be extracted as nucleotides or amino ...
thus providing an elegant mechanism for differential control of operon-encoded protein levels. Although previously thought to be rare, leaderless genes are now known to be fairly common in prokaryotes and in the archaea, where as many as 69% of protein coding transcripts are leaderless [24,38,46...
as gene finding and CDS predictors) such asGlimmer(Prokaryotes),GlimmerHMM(Eukaryotes), andGeneMarkS(Prokaryotes, Eukaryotes, and Metagenomes) that are used to identify the coding genes without reporting untranslated regions and splice variants.Aragorncan be used for transfer RNA (tRNA) prediction. ...