The rapidly growing fungal genome database provides candidates to explain how fungi see not only blue, but also near-UV, green and red light. At the same time, there are surprises in the genomes, including photoreceptors for which there are no obvious photoresponses. Linking these genes and ...
INTRODUCTIONTherecentdramaticincreaseinthenumberandscaleofgenomesequenceandfunctionalgenomicdata(i.e.prote-omic,microarray,RNA-sequence,ChIP–ChIP,etc.)hasmadeitincreasinglychallengingforscientiststonavigatethroughthemilieuofdata.Importantly,ithasbecomeessentialtobeabletointerrogatedatasetsfrommultiplegenomesinanintegrated...
The current release of FungiDB contains genome sequence and annotation from 18 species spanning several fungal classes, including the Ascomycota classes, Eurotiomycetes, Sordariomycetes, Saccharomycetes and the Basidiomycota orders, Pucciniomycetes and Tremellomycetes, and the basal ‘Zygomycete’ ...
FungiDB is a panfungal genome database that collects gene information and functional data and provides search tools for 61 species of fungi and oomycetes... DO Inglis,MS Skrzypek,E Liaw,... - 《Eukaryotic Cell》 被引量: 23发表: 2014年 FungiDB: An Integrated Bioinformatic Resource for Fungi...
cerevisiae databases Web resources include: NCBI (Entrez ? Genome ? Eukaryotic genome projects) EBI http://www.ebi.ac.uk/proteome/ SGD: Saccharomyces Genome Database http://www.yeastgenome.org Most Important! MIPS Comprehensive Yeast Genome Database (MIPS = Munich Information Center for Protein ...
Saccharomyces Genome database Gcn2 Gpa1 Gpa2 Gpr1 Hog1 Mep2 Pbs2 Pho84 Pho87 Ptr3 Rgt2 Sit4 Sko1 Sln1 Snf3 Ssk1 Ssk2 Ssk22 Ssy1 Ssy5 Ste2 Ste3 Stp1 Stp2 Tor1 Tor2 Ypd1 Glossary Mating type A strain or clone or other isolate made ...
The nucleotide sequence of the genome of HTLV-III, the infectious agent etiologically associated with the acquired immune deficiency syndrome, predicts a s... NC Kan,G Franchini,F Wong-Staal,... - 《Science》 被引量: 235发表: 1986年 Presence of the long chain form of polysialic acid of...
Integration of genome data and protein structures: prediction of protein folds, protein interactions and ‘molecular phenotypes’ of single nucleotide poly... With the massive amount of sequence and structural data being produced, new avenues emerge for exploiting the information therein for applications...
Meanwhile, their collaborators at UCSD searched through the Cancer Genome Atlas database for fungal sequences. The scientists at Duke and Cornell also conducted a similar experiment using the genome atlas. Both groups found what they were looking for. ...
Genome Res. 27, 1207–1219 (2017). CAS PubMed PubMed Central Google Scholar López, S. C. et al. Induction of genes encoding plant cell wall-degrading carbohydrate-active enzymes by lignocellulose-derived monosaccharides and cellobiose in the white-rot fungus Dichomitus squalens. Appl. Environ...