The results of the transcriptome analysis suggested that the expression of ethylene (ETH) and abscisic acid (ABA) signaling-related genes was induced, which was in contrast to the decrease in the expression of most of the IAA signaling-related genes. A combined transcriptomics and metabolomics ...
On the contrary, many endogenous and exogenous plant hormones, such as auxin (AUX), ethylene (ETH), abscisic acid (ABA), and gibberellic acid (GA), operate together or against one another to govern plant growth and development [3]. In peach, PpIAA1 and PpERF4 form a positive feedback ...
In the process of Agrobacterium-mediated genetic transformation, hypocotyls from Jin668 can undergo dedifferentiation and re-differentiation to form embryogenic callus and finally regenerate plants via somatic embryogenesis (Fig. 1a), while TM-1 can only produce non-embryogenic callus that cannot undergo...
Most modern single-cell methods generate data on hundreds to thousands of cells in parallel to enable proper characterization of heterogeneous or dynamic cellular systems. Two general strategies have been developed to generate data at this scale. First, cells can be isolated into individual reaction v...
Molecular functions of A-to-I editing ADARs deaminate adenosine in dsRNA or the A-form helix (DNA: RNA hybrid) [46,47,48]. The introduction of non-canonical base pairs into the dsRNA structure increases complexity, which actually affects the efficiency of adenosine editing (Fig.2). The two...
related genes, including those related to stress hormone biosynthesis. In line with transcriptomic data, TSA-induced explants accumulated salicylic acid (SA) and abscisic acid (ABA), suggesting the role of histone acetylation (Hac) in regulating stress hormone-related responses during SE induction. ...
SUMO enzymes regulate another form of repetitive DNA sequences within the genome–rDNA. All three E3 ligases in yeast are crucial for maintaining rDNA stability [Citation126]. If a double-strand break occurs within the rDNA, recombination may be necessary to repair the damage. To facilitate this...
form of combination of existing elements. However, genetic algorithm approaches are predicated on the idea of choosing parents randomly to produce offspring, and further on introducing randomization to determine which components of the parents should be combined. By contrast, the scatter search approach...
In recent years, stochastic descriptions of biochemical reactions based on the Master Equation (ME) have become widespread. These are especially relevant for models involving gene regulation. Gillespie’s Stochastic Simulation Algorithm (SSA) is the most
The CWxP motif of transmembrane helix 6 (x: any residue) is highly conserved in class A GPCRs. Within this motif, W6.48 is a big star in the theory of the global “toggle switch” because of its key role in the activation mechanism of GPCRs upon ligand binding. With all footlights ...