[ Fiji Is Just ImageJ ] Fiji is a "batteries-included" distribution ofImageJ—a popular, free scientific image processing application—which includes a lot of plugins organized into a coherent menu structure. Fiji compares to ImageJ as Ubuntu compares to Linux. ...
CITATION: If you use Lusca for your research, please be so kind to cite our publication: “Lusca: FIJI (ImageJ) based tool for automated morphological analysis of cellular and subcellular structures”. LICENSE: This program is free software; you can redistribute it and/or modify it. This pro...
Fiji (Fiji is Just ImageJ, http://fiji.sc/) is a distribution of ImageJ, that includes (amongst other things) a lot of plugins, some useful libraries and an updater to keep everything up to date. Amongst other things, it is made to facilitate inter-operability...
The ImageJ/Fiji software provides a user-friendly and free alternative for parametric coding of digital subtraction angiography. Graphical Abstract Download: Download high-res image (239KB) Download: Download full-size image Introduction Digital subtraction angiography (DSA) digitally removes radio-opaque...
We present a software plugin to analyze and quantify spatial patterns of objects in images using the free open-source image-processing platform ImageJ [1] or its distribution Fiji [2]. The spatial arrangement of objects relative to each other is a rich source of phenotypic information. This ra...
“Analysis of focal adhesions” performs a multi-step, multi-executable analysis of focal adhesions. It utilizes a download widget, an ImageJ macro for segmentation, and Jupyter notebooks for data analysis and visualization. Each module (widget) is isolated within its own software container, ...
To calculate the percentage of live cells, divide the number of spots detected in the green channel by the total number of green and red cells in the image and multiply by 100%. To analyze the next image, remember to delete all ROIs from the previous measurement. ...
Providing fast robust multi-parameter analyses of skeletal muscle physiology-pathology, MuscleJ is available as a free tool for the skeletal muscle community.Similar content being viewed by others MuscleJ2: a rebuilding of MuscleJ with new features for high-content analysis of skeletal muscle ...
Gotcha. For the time being, the best way to deploy and update Fiji without using the Updater is probably to grab the latest ZIPs from https://downloads.imagej.net/fiji/latest/, unpacking it over top of the previous installation, if any. The app itself does not have version info where ...
After registration, stacks are combined in a coherent multi-modal and/or multi-time volume that can be explored using the ImageJ viewer. Versatility: Fijiyama is a generic tool, efficient at any scale, tissue or imaging modality. It has been tested on the most common imaging approaches in ...