Plot the most basic volcano plotFor the most basic volcano plot, only a single data-frame or -matrix of test results is required, containing transcript names, log2FC, and adjusted or unadjusted P values. The default cut-off for log2FC is >|2|; the default cut-off for P value is ...
For the volcano plot, the fold difference is the average of triplicate, and the p value was calculated comparing animals vaccinated with VLP to those vaccinated with VLP and polyICLC. (b) Seven days after vaccination, cells from the draining LN were evaluated for Tfh populations. Cells were ...
Fig. 1: Energy status of tumor margin in OSCC is upregulation and correlates with low expression of RRAD. AH&E stain image of patient with advanced OSCC, divided into different areas guided by pathology experts. Scale bar: 1000 μm.BVisual cluster map of global metabolite expression levels...
(EOR)are demonstrated with the PGN nanocatalysts and over 2.5 folds of enhancement can be achieved.A volcano plot is derived to describe the relationship between the catalytic activities and gap size of the PGN nanocatalysts,which is well explained by the interplay of their light harvesting and ...
Volcano plot showed a differential expression of nearly 1300 transcripts, including 641 upregulated genes and 608 downregulated genes in Th9 CAR-T cells compared to Th1 CAR-T cells (Supplementary Fig. 3a, b). In addition to IL9 and IFN-γ, Th9 CAR-T cells expressed completely different ...
(A) Volcano plot depicting the differentially expressed genes (DEGs) between MELK knockdown HCC-LM3 cells and the corresponding control HCC-LM3 cells. (B) GO enrichment analysis of the DEGs. (C) KEGG enrichment analysis of the DEGs. (D) GSEA revealing the close correlation between MELK ...
Olanzapine (OLZ) reverses chronic stress-induced anxiety. Chronic stress promotes cancer development via abnormal neuro-endocrine activation. However, how intervention of brain-body interaction reverses chronic stress-induced tumorigenesis remains elusiv
A Volcano plot of differentially expressed genes (DEGs) in rbr7 compared with Kit. The DEGs were defined as FC (fold change) ≥ 2, FDR (false discovery rate) ≤ 0.05. B GO enrichment terms for the 1206 down-regulated genes in rbr7 compared with Kit. C GO enrichment terms ...
aVolcano plot of the differentially expressed genes (DEGs) based on RNA-seq analysis of 4T1 tumor tissue from the sgPik3cg-DHP/DGA-NVs group (1 × 1010NVs every two days) compared to the control group on day 16 post-model establishment.n = 3 mice per group.bEnriched gene on...
(A) Volcano plot showing that the differentially expressed gene METTL3 was related to shNCBP1 in SU-DHL-4 cells. (B) RT‒qPCR verified that METTL3 was downregulated by shNCBP1. (C) METTL3 expression was significantly related to NCBP1 (r = 0.7; P < 0.0001) in DLBCL tissue...