et al. Dual RNA-seq reveals viral infections in asthmatic children without respiratory illness which are associated with changes in the airway transcriptome. Genome Biol. 18, 12 (2017) FURTHER READING Westermann, A. J., Gorski, S. A. & Vogel, J. Dual RNA-seq of pathogen and host...
This complexity agrees with the adaptability of most bacteria to varied environments including, in the case of pathogens, the new niches encountered in the host. Recent RNA-Seq studies have analyzed simultaneously gene expression in the...
W. 2014. Dual RNA-seq of the plant pathogen Phytophthora ramorum and its tanoak host. Tree Genet. & Genomes 10(3):489-502.Hayden, K. J., M. Garbelotto, B. J. Knaus, R. C. Cronn, H. Rai et al., 2014 Dual RNA-seq of the plant pathogen Phytophthora ramorum and its tanoak ...
Dual RNA-seq of pathogen and host. Nat Rev Microbiol. 2012;10(9):618–30. Article CAS PubMed Google Scholar Hayden KJ, Garbelotto M, Knaus BJ, Cronn RC, Rai H, Wright JW. Dual RNA-seq of the plant pathogen Phytophthora ramorum and its tanoak host. Tree Genet Genomes. 2014;10(3...
Dual RNA-sequencing, a technique which allows the concurrent detection of both pathogen and host transcripts during infection, was performed. Approximately 1% of the reads mapped to the draft genome ofP. cinnamomiwhile 78% of the reads mapped to theEucalyptus grandisgenome. The highest expressedP....
High-throughput RNA sequencing (RNA-seq) has become an instrumental assay for the analysis of multiple aspects of an organism's transcriptome. Further, the analysis of a biological specimen's associated microbiome can also be performed using RNA-seq data and this application is gaining interest in...
Usually, such limitations can be solved using high-depth sequencing, pathogen and host rRNA depletion, and enrichment of samples for infected host cells by fluorescence-activated cell sorting ( 6 )。 Dual RNA-seq分析流程 注意看下这个图 【原文高清图链接】的下方两个注释文件Annotation File ,图中把...
Dual RNA-seq has been shown to monitor the all classes of coding and noncoding transcripts of both host and pathogen simultaneously. CD Genomics is offering a high-resolution, affordable and straightforward dual RNA-seq service to provide direct insight into host–pathogen interplay. What Is Dual...
Here we use a generic ‘dual RNA-seq’ approach to profile RNA expression simultaneously in pathogen and host during Salmonella enterica serovar Typhimurium infection and reveal the molecular impact of bacterial riboregulators. We identify a PhoP-activated small RNA, PinT, which upon bacterial ...
Cloney, R. Microbial genetics: Dual RNA-seq for host-pathogen transcriptomics. Nat. Rev. Genet. 17, 126-7 (2016).Cloney, R. (2016). Microbial genetics: Dual RNA-seq for host-pathogen transcriptomics. Nature Reviews Genetics 17, 126-127....