DNA Sequence Assembler is the only tool that fully automates the assembly process: Automatically detect and trim low quality regions of your samples Automatically trim vector/primer sequences Automatically correct the ambiguities in your contig Automatically save the contig to disk With DNA Sequence Ass...
Input your DNA sequence below to retrieve the translated amino acid sequence. For deeper analysis of your sequence, please check out our Codon Optimization tool, or to compare two sequences at the DNA or protein level, you can utilize our Sequence Alignment tool. Additionally you can use ...
Background With advances in DNA re-sequencing methods and Next-Generation parallel sequencing approaches, there has been a large increase in genomic efforts to define and analyze the sequence variability present among individuals within a species. For very polymorphic species such as maize, this...
另外一个很古老但至今仍然很流行的多序列比对(multiple sequence alignment)工具叫Clustalhttp://www.clustal.org/. Clustal的图形用户界面版软件叫ClustalX,而命令行模式的版本叫ClustalW,Ubuntu下可以轻松安装CulstalW,只需sudo apt-get install clustalw. Clustal的原理是渐进比对:“在比对过程中,先对所有的序列进行...
to the nanogram range and performed DNA sequencing. Basic Local Alignment Search Tool (BLAST) is used as a sequence similarity search program to confirm the identity percentage between query and subject. More than 97% of nucleotide identities between query and subject sequences have been obtained ...
DNA Baser Sequence Assembler Fully functional trial This trial version isfullyfunctional except the saving the contig to disk (the contig is saved, but advertisement is inserted over its bases). When the trial period ends, you can still use DNA Baser Assembler to: ...
“DNASTAR is my favorite tool for sequence analysis. My colleagues also love it.” Dr. Xin Yin, Sanford Burnham Prebys Medical Discovery Institute “Easy to use, intuitive interface makes working with sequences easy.” Matthew Nilles, University of North Dakota ...
The alignment of short DNA read sequencing data to a human reference genome sequence has become a standard step in the analysis pipeline for short DNA read sequence data. As the rate at which short read DNA sequence data is being produced doubles every 5 months, analysis of this data in a...
MLDSP-GUI: An alignment-free standalone tool with an interactive graphical user interface for DNA sequence comparison and analysis MLDSP-GUI:一个无对齐的独立工具,具有用于DNA序列比较和分析的交互式图形用户界面 Abstract Summary: MLDSP-GUI (Machine Learning with Digital Signal Processing) is an open-...
We present a performance per watt analysis of CUDAlign 4.0, a parallel strategy to obtain the optimal pairwise alignment of huge DNA sequences in multi-GPU platforms using the exact Smith-Waterman method. Our study includes acceleration factors, performa