Before running any of the scripts, loadcreate_cistarget_databasesconda environment and set thecreate_cistarget_databases_dirvariable to the dir that contains the cloned repo. #Activate conda environment.conda activate create_cistarget_databases#Set ${create_cistarget_databases_dir} variable to path w...
Creating cisTarget databases can be a very memory intensive job as it needs to create/store a 2D matrix with dimensions (number of motifs/tracks vs number of regions/genes) or vice versa. Besides this, it needs (relatively little) memory to store motif/tracks and regions/genes names. ...