Hi All, I am trying to use fasterq-dump to extract fasta files for this accession SRR16235266 Anytime I use it fastq files are rather generated. Below is the command I use fasterq-dump --fasta 60 SRR16235266 Please advice.
10x BAMs produced by Long Ranger v2.1+ and Cell Ranger v1.2+ contain header fields that permit automatic conversion to the correct FASTQ sequences. Older 10x pipelines require arguments to indicate which pipeline created the BAM. BAM files from SRA ...
生物信息数据格式互相转换 bam bcf bed bigwig bplink clustal cram csv embl fasta fastq genbank gfa gff maf newick nexus phylip phyloxml plink sam scf sra stockholm tsv twobit vcf wig xls xmfa https://github.com/bioconvert/bioconvert
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