pdb-atomUses Bio.PDB to determine the (partial) protein sequence as it appears in the structure based on the atom coordinate section of the file (requires NumPy). phdPHD files are output from PHRED, used by PHRAP and CONSED for input. ...
biomojifyreads one or more input FASTA, FASTQ, or VCF (experimental) files, and converts them to emoji. FASTA files For a DNA sequence: $ cat test.fasta >SEQUENCE_1 ATAGTCAGTACGTAGTCGATGCTAGCTAGTAGGGGGGCTGATGATGTAGCTCGATCGTACGTACGTACGCTGAGTCAGTG CACGTACGCTGCATGCCNTAGNCTAAAAGNCTANGCTAGC...
What happens to mRNA after it completes transcription? How does RNA participate in DNA replication? What is the secondary structure of transfer RNA? Explain the process of protein synthesis from mRNA to protein. What does the RNA sequence present in both the initial transcript (pre-mRNA) and mR...
7strandWhich DNA strand, as forward (+), reverse (-), unstranded (.) or unknown (?) 8phasePhase of the coding sequence as 0, 1, or 2 (i.e. whether the exon ends mid-codon), only applies toCDSfeatures 9attributesAll other information, as a string of pairs ofkey=value;, though...
The University of California, Santa Cruz (UCSC) Genome Browser website (http://genome.ucsc.edu/) provides a large database of publicly available sequence a... R Brooke,K Donna,RM Kuhn,... - 《Nucleic Acids Research》 被引量: 4211发表: 2010年 BigWig and BigBed: enabling browsing of ...
The present invention relates to a method for modifying a targeted site of double-stranded DNA in a host cell, wherein (a) a sequence complementary to the target strand of a target nucleotide sequence in the selected double-stranded DNA is selected. A DNA encoding a crRNA containing the DNA...
Isolate DS-1 was a bacterium which showed 93% sequence homology (16S ribosomal DNA) to its nearest phylogenetic neighbor, an alpha-proteobacterium. Strain DS-1 grew heterotrophically in LADPEDS-salts-glass wool medium and converted the set of aryl-substituted alkanes to the corresponding aryl-...
PROFILEGRAPH: an interactive graphical tool for protein sequence analysis The computer program PROFILEGRAPH, a graphical interactive tool for the analysis of amino acid sequences, is described. The main task of the program is to ... K.,Hofmann,W.,... - 《Computer Applications in the Bioscienc...
Fastq to Fasta Sequence Converter Provided by bugaco.com Convert file from: to Alphabet: None DNA RNA Protein Nucleotide Input format: fastq FASTQ files are a bit like FASTA files but also include sequencing qualities. In Biopython, 'fastq' refers to Sanger style FASTQ files which encode ...
FirstOrDefault().CastTo<Protein>().Transform<ConsensusSequence, string>();Or alternatively invoking Transform weakly-typed:var orfs = dnaSeq.FindORFs(minLength: 15, maxLength: 150); var seq = orfs.FirstOrDefault().CastTo<Protein>().Transform<ConsensusSequence>();...