Comparison of whole genomes of tick-borne encephalitis virus from mountainous alpine regions and regions with a lower altitudeTick-borne encephalitis virusMountainsGenetic analysisTick-borne encephalitisTick-borne encephalitis virus strainsTick-borne encephalitis (TBE) has been a notifiable disease in Germany...
Here we created a uniformly processed whole-genome-sequenced (WGS) inventory of 7,108 matched tumour and normal genomes from two unpaired primary and metastatic cohorts. We first collated the Hartwig Medical Foundation (Hartwig) dataset5, which included 4,784 samples from 4,375 patients with metas...
More generally, our findings indicate that demographic inference from a small number of genomes, routine in genomic studies of nonmodel organisms, should be interpreted cautiously, as these models cannot recapitulate other summaries of the data. 展开 ...
Whole genome comparison of assembled/concatenated contigs of four genomes.Lixin ZhangJingping XieMayuri PatelArsala BakhtyarGarth D. EhrlichAzad AhmedJosh EarlCarl F. MarrsDaniel ClemansTimothy F. Murphy
45. Given that genome-wide comparisons indicate that the human genome only has approximately 30–40% and 25% more genes than the genomes of Drosophila/Caenorhabditis and amphioxus, respectively, gene loss must occur after whole-genome duplications; however, gene loss did not occur evenly, and ...
Example of GBKviz genome comparison and visualization results. Fig.1: 4 phage whole genomes comparison result Fig.2: 4 E.coli partial genomes comparison result Fig.3: 4 E.coli whole genomes comparison result Fig.4: Simple CDS visualization with gene label ...
Using both whole-genome and short-read alignments, we identified the genomic landscape of SVs between the two genomes, some of which may account for several phenotypic differences, including their differ- ential responses to aluminum toxicity and iron deficiency, and the development of different ...
And, the newest CYP families appear to have driven the diversity of angiosperms in mediating the synthesis of pigments, odorants, flavors and order-/genus-specific secondary metabolites. Family-by-family comparisons allow the visualization of plant genome plasticity by whole genome duplications and ...
Conservation genomics: applying whole genome studies to species conservation efforts Studies of complete genomes are leading to a new understanding of the biology of mammals and providing ongoing insights into the fundamental aspects of the... Ryder,A O. - 《Cytogenetic & Genome Research》 被引量:...
(GO), or Kyoto Encyclopedia of Genes and Genomes (KEGG). For simplicity we will speak only of GO classes (or categories, or nodes) but many concepts are also applicable to other annotation systems. There are many methods and models for performing this re-processing [4–6]. Two of the ...