Starr: Simple tiling array analysis of Affymetrix ChIP-chip data - Zacher, Soeding, et al. - 2009 () Citation Context ...lated species (Supplementary Table S1). ChIPseq experiments were re-analyzed with PRI-CAT. For ChIP-chip analysis, probe sequences were remapped to the TAIR9 ...
DiffBind Differential binding analysis of ChIP-Seq peak data:ChIP-seq数据峰值diffbind结合差异分析 热度: Peak identification for ChIP-seq data with no controls 热度: ChIP-chip 与 ChIP-seq 数据处理方法与分析平台.pdf 热度: Starr:Simple Ti l ing ARRay analysis of Affymetrix ChIP-chipdata ...
et al. scFTD-seq: freeze-thaw lysis based, portable approach toward highly distributed single-cell 3' mRNA profiling. Nucleic Acids Res. 47, e16, https://doi.org/10.1093/nar/gky1173 (2019). 174. Wu, C. et al. A planar dielectrophoresis-based chip for high-throughput cell pairing. ...
Incorporating multiple techniques into single-cell microfluidic devices to actively manipulate bioparticles has gained widespread interest in improving the capability of such devices. For instance, specifically labeling cells with immunomagnetic beads and subjecting the cells to a magnetic force via micromagn...
Arrigoni, L., et al.Standardizing chromatin research: a simple and universal method for ChIP-seq.Nucl Acids Res.44(7), e67 (2016). Essen, D., Dullforce, P., Brocker, T., Gray, D.Cellular interactions involved in Th cell memory.J Immunol.165(7), 3640-3646 (2000). ...
wherein said set of oligonucleotide probes comprises SEQ ID NOS: 1-214 or the complement of SEQ ID NOS: 1-214; and at least one of each of the following oligonucleotide control probes: a positive control probe, a negative control probe, a hybridization control probe and an immobilization con...
Compared with scRNA-seq, we observed higher Pearson correlation coefficients from scProteomics for both cell types (Fig. 6a). Specifically, the medians of correlation coefficients of mRNA abundances are 0.60 (C10) and 0.71 (RAW), while the coefficients of protein abundances significantly increased ...
③eCLIP; iCLIP; RNA Bind-n-seq; RIP-chip; RIP-seq; PRO-cap; GRO-cap; PRO-seq; Circulome-seq等等... (2) Functional characterization: 包括的数据有 enhancer reporter assay; Flow-FISH CRISPR screen; MPRA; proliferation CRISPR screen; STARR-seq; FACS CRISPR screen; perturbation followed by ...