To plot LD blocks, we also provide a small script as an example for how it can be easily done in R using the LDheatmap package (by default, is plotted). % cat testLD_2.ld | bash ../scripts/LD_blocks.sh chrSIM_21 2000 5000 Notes LD can be affected by: New mutations, genet...
Fixing comment in bash activate script created on Windows Jan 31, 2020 src/crcengine Fixing up backwards compatibility and warnings Apr 17, 2023 tests Fixing up backwards compatibility and warnings Apr 17, 2023 .gitignore Including autodoc in readthedocs build ...
/bin/bash #PBS -N SCF #PBS -l nodes=1:ppn=4 #PBS -q batch #PBS -l walltime=100:00:00 ulimit -s unlimited cd $PBS_O_WORKDIR mpirun -np 4 PWmat | tee output Note Submit the task with a pbs script Second Step: "NONSCF" calculation...
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Thanks for replying but I was careful to download the script.Hi ACS:I am trying to run under bash but that was after it did not work under ksh. I got this output when I tried the same values under ksh.$ caljd.sh -S "-" -o -e 245425000--0000I will try the perl version but...
Free energy perturbation is one of the most valuable methods in drug design, it has a very strong theoretical foundation and has been verified in various hit-to-lead drug development programs. However, the tedious setting up procedure FEP required is a major factor that contributes to its limite...
Script: #!/bin/bash#Description: Verify CreateDisksFromAnnotation implementation and usage#Check if CreateDisksFromAnnotation is consistently used with storageReservedPercentageast-grep --pattern'CreateDisksFromAnnotation($$$)'#Check for any other storage reservation calculations that might need similar upd...
Introduce scenario-cloner script (#1360) Sep 20, 2023 spec Use email from JWT to initialize and couple users Mar 6, 2025 tmp/pids Update Gitignore to allow logs and pidfile dirs Oct 29, 2021 vendor Add support for owned, public, and private scenarios ...
Open with a text editor the script file "ezreson" in the source directory and set theEZRESON_DIRvariable as the path of the source directory. Add the source directory to the global environment variablePATHin e.g., ".bash_profile" or ".bashrc" under your HOME directory. ...
Recreate jupyter notebooks from the paired *.py "py:percent" files (only these files are stored in git-repo), by executing the bash-script: Notebooks/recreate_ipynbs.sh Run pyalgo on all AccDB cars to re-create the H5 file needed for CarsDB-compare notebook, etc: Notebooks/recreate_py...