Gene set enrichment analysis was performed using R/bioconductor packages fgsea and DOSE96,97. Ranked gene lists were first constructed using log2(FC) values for the genes in any given DESeq2 contrast by sorting log2(FC) values in descending order and filtering out duplicate entries. Ranked li...
The distortion is given by d1(0, 0) = −32(1 − 3Γ/κ)/Γ3. The physics of two-photon scattering is richer, as the energy of the individual photons is not necessarily conserved, which leads to photon correlations. The two-photon scattering matrix has previously been ...
742789 (Xenoscope), by the SNF grant 20FL20-201437, as well as by the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska -Curie grant agreement No 860881-HIDDeN. We thank the electronics and mechanical workshops in the UZH Physics Department for their...
Given θ∈S1 we define the rotation matrix R(θ), the 90° rotation Conditions for the existence of synchronous steady-states We begin our analysis by defining the set S on which the vector fields of the dynamics (5), (7) coincide. In other words, the residual dynamics ≔ρ(x,u,ω...
Given a set S of n geometric sites in the plane, their order-k Voronoi diagram, Vk(S), is a planar subdivision such that every point within an order-k Voronoi region has the same k nearest sites. The common boundary between two adjacent Voronoi regions is called a Voronoi edge, and th...
[24]. Briefly, the cophenetic correlation coefficient is used as a measure of the robustness of the method in producing stable groups of genes from different random initializations for a given number of factors (k). Based on this estimation, a value ofk= 8 was selected from a set of 100 ...
Three steps: (1) assign a statistical score to each junctional read’s alignment to quantify the likelihood that the read alignment is truly from RNA expression; (2) aggregate read scores to summarize the likelihood that a given junction is a true positive; and (3) report single-cell ...
Chromatin remodeling is a process using the energy of ATP hydrolysis to destabilize, move, or restructure nucleosomes. Chromatin remodeling complexes contain four different families, SWI/SNF, ISWI, CHD, and INO80, but share a relatively conserved ATPase domain. The result of their actions on nucle...
Over a given time interval Δ𝑡Δt that can be set to 𝑡dyntdyn, the disc dynamical time, the amount of gas mass converted into stars can be computed as Δ𝑀∗=𝜓Δ𝑡,ΔM*=ψΔt, (8) with 𝜓ψ, the star formation rate, obtained from the mass of gas measured at ...
You can install the previous releases of YSoSerial.NET fromthe releases page Build from source: Set-ExecutionPolicyBypass-ScopeProcess-Force; [System.Net.ServicePointManager]::SecurityProtocol=[System.Net.ServicePointManager]::SecurityProtocol-bor3072; iex ((New-ObjectSystem.Net.WebClient).DownloadString('...