Claire RogelGaillard
PICRUSt was used to evaluate the functional profiles of the pig gut microbiota in the three gut locations and to explore the potential links with FCR21. The results indicated that 11 pathways, including neurodegenerative diseases, enzyme families, environmental adaptation, cellular processes and signalin...
A reference gene catalogue of the pig gut microbiome Nat Microbiol, 1 (2016), pp. 1-6 Google Scholar [13] L. Zhao, G. Wang, P. Siegel, C. He, H. Wang, W. Zhao, et al. Quantitative genetic background of the host influences gut microbiomes in chickens Sci Rep, 3 (2013), Arti...
In this work, to construct an informational public resource database and explore soil microbial dark matter from metagenomes, we first reconstructed MAGs from global-scale genome-resolved metagenomics to expand the genomic catalogue of soil microbiomes and shed light on microbial dark matter in soils...
A daily digest of scientific microbiome papers, by the MD team. Founded by Elisabeth Bik, microbiome and science integrity consultant. Twitter: @microbiomdigest
A metagenomic catalogue of the ruminant gut archaeome– Jiandui Mi –Nature Communications Large-scale metagenomic assembly provide new insights into the genetic evolution of gut microbiomes in plateau ungulates– Bo Xu –NPJ Biofilms and Microbiomes ...
Analyses of gut microbiome composition in livestock species have shown its potential to contribute to the regulation of complex phenotypes. However, little is known about the host genetic control over the gut microbial communities. In pigs, previous stud
A human gut microbial gene catalogue established by metagenomic sequencing. Nature. 2010;464(7285):59–65. Article CAS PubMed PubMed Central Google Scholar Nicholson JK, Holmes E, Kinross J, Burcelin R, Gibson G, Jia W, Pettersson S. Host-gut microbiota metabolic interactions. Science. ...
However, underlying mechanisms remain poorly described and microbiome-based applications are ham- pered due to our still limited knowledge about gut microbiota members16,17. Sequencing studies have provided detailed insights into the pig gut microbiome, including a reference catalogue of ~8 million ...
Better understanding of antibiotic resistance in bovine gut is needed to assess its potential effects based on metagenomic approach and analysis. In this study, we collected 40 fecal samples to explore drug resistance derived from antibiotic use in the bacterial community by an analysis of the ...