1、 在Wiki pathways 主页的 Find Pathways 区域输入关键词(如通路名称、基因或蛋白名称、疾病名称等)后点击 Search 出现如下界面 2、 通过选择目标物种对结果进行筛选,若目标物种为人,下拉选择 Homo Sapiens,点击 Search 出现如下界面 3、点击目标结果查看通路图 出现如下界面 Download 点击下载,可以下载所需格式的图...
使用WikiPathways API进行富集分析,您可以用以下代码请求数据: # 定义API请求URLapi_url<-"# 调用API获取富集结果response<-GET(paste0(api_url,"getPathways?geneList=",paste(genes,collapse=",")))# 检查请求状态if(response$status_code==200){pathways_data<-fromJSON(content(response,"text"),flatten=TR...
WikiPathways: Pathway editing for the people . PLoS Biology. DOI: TODO: clickthrough URL 10.1371/journal.pbio.0060184 .Pico AR , Kelder T , Iersel MPv , Hanspers K , Conklin BR , Evelo C ( 2008 ) WikiPathways: pathway editing for the people . PLoS Biol 6 : e184...
WikiPathways homology- Homology-converted GPMLs by organism Development projects- for developer project planning 🙋♀️ Help and Disscussion forums Help- Public help forum FAQ- Frequently Asked Questions Pathway Curation Tasks- Prioritized pathway curation tasks; for beginners, advanced and domain-...
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Add a description, image, and links to the wikipathways topic page so that developers can more easily learn about it. Curate this topic Add this topic to your repo To associate your repository with the wikipathways topic, visit your repo's landing page and select "manage topics." Lea...
WikiPathways is an open, public platform dedicated to the curation of biological pathways by and for the scientific community. More about WikiPathways. Browse by species and category. You can search by:. Gene or protein name (p53). Any page content (canc
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Java library for WikiPathways webservice. Contribute to wikipathways/wikipathways-new-api-client-java development by creating an account on GitHub.
In this paper we present the open-source WikiPathways app for Cytoscape ( http://apps.cytoscape.org/apps/wikipathways) that can be used to import biological pathways for data visualization and network analysis. WikiPathways is an open, collaborative biological pathway database that provides fully ...