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et al. Genomic and gene regulatory signatures of cryptozoic adaptation: Loss of blue sensitive photoreceptors through expansion of long wavelength-opsin expression in the red flour beetle Tribolium castaneum. Front. Zool. 4, 24 (2007). 23. Koh, K., Zheng, X. & Sehgal, A. JETLAG resets ...
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C. The reduced genomes of Parcubacteria (OD1) contain signatures of a symbiotic lifestyle. Front. Microbiol. 6, 713 (2015). 19. Campbell, J. H. et al. UGA is an additional glycine codon in uncultured SR1 bacteria from the human microbiota. Proc. Natl Acad. Sci. USA 110, 5540–...
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E. Microbial domestication signatures of Lactococcus lactis can be reproduced by experimental evolution. Genome Res 22, 115–24 (2012). 14. van de Guchte, M. et al. The complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolution. Proc Natl Acad Sci USA...
C. Bacterial assemblages of the eastern Atlantic Ocean reveal both vertical and latitudinal biogeographic signatures. Biogeosciences 9, 2177–2193 (2012). 12. Brown, M. V. et al. Microbial community structure in the North Pacific Ocean. ISME J. 3, 1374–1386 (2009). 13. Agogué, H., ...
To test for signatures of positive selection acting on giraffe lineage for each of the genes, we compared the likelihood scores of selection models implemented in CODEML in the PAML package, version 4.7 (ref. 60), using likelihood ratio tests (LRTs). Branch-site models were used to identify ...