These alterations represent three types of editing: C to U, U to C and the very rare type U to G with a differential rate depending on exposure times. Two and twelve hours are shown as the maximum editing rate. However, RNA editing disturbance over 24h was observed, possibly due to the...
PART 1: Read mapping and RNA-editing calling For paired-end RNA-seq data: COMMAND:./RADAR read_mapping_and_RNA_editing_calling -1 "full_path_of_fastq1" -2 "full_path_of_fastq2" --stranded "true/false" -n "outname" -o "output_dir" -t "maximum_threads" ...
RNA G-Quadruplexes in the model plant species Arabidopsis thaliana prevalence and possible functional roles 热度: SevenlargevariationsintheextentofRNAeditinginplantmitochondria betweenthreeecotypesofArabidopsisthaliana AnjaZehrmann,JohannesA.vanderMerwe,DaniilVerbitskiy,AxelBrennicke,MizukiTakenaka ...
Provides a quick introduction on types of genetic tests including Germline tests, Somatic tests, Single gene tests, Panel test, Exome sequencing and Genom sequencing.
RNA Transfection Reagent also provided efficient microRNA transfection and enabled effective gene knockouts when it was used to deliver sgRNAs for CRISPR/Cas9-mediated gene editing. The high transfection efficiency, low cytotoxicity, and versatility of this reagent make it a powerful tool for RNA...
-1131-MESSENGER RNA EDITING OF APOLIPOPROTEIN (APO) B IN HUMAN INTESTINAL CELL LINE CACO-2 : THE 54th ANNUAL SCIENTIFIC MEETING OF THE JAPANESE CIRCULATION... (2015). Single-cell messenger RNA sequencing reveals rare intestinal cell types. Na- ture 525, 251-255.Gracz AD, Fuller MK, Wang ...
of the same type. To enable nanopore sequencing for broadly applicable methylation discovery, we generated a training dataset from an assortment of bacterial species and developed a method, named nanodisco (https://github.com/fanglab/nanodisco), that couples the identification and fine mapping of ...
Single-cell RNA-sequencing (scRNA-seq) is a powerful technique that provides high-resolution expression profiling of individual cells. It significantly advances our understanding of cellular diversity and function. Despite its potential, the analysis of scRNA-seq data poses considerable challenges related...
The piechart of each node shows the proportions of links from different cancer types. E–G Anti-tumor activities by silencing the predicted pan-cancer proteome regulators, RSL1D1, DDX21 and SMC2. We conducted shRNA knock-down of the predicted regulators in lung cancer (H847), colon cancer...
Massively parallel single-nucleus RNA-seq with DroNc-seq. Nat. Methods 14, 955 (2017). Article CAS PubMed PubMed Central Google Scholar Lake, B. B. et al. Integrative single-cell analysis of transcriptional and epigenetic states in the human adult brain. Nat. Biotechnol. 36, 70–80 (...