Ekins, S., Nikolsky, Y., Bugrim, A., Kirillov, E., and Nikolskaya, T. (2007) Pathway mapping tools for analysis of high content data. Methods Mol Biol 356, 319‐350.Ekins, S., Nikolsky, Y., Bugrim, A., Kinllov, E., Ni...
Pathway mapping tools for analysis of high content data. The complexity of human biology requires a systems approach that uses computational approaches to integrate different data types. Systems biology encompass... S Ekins,Y Nikolsky,A Bugrim,... - 《Methods Mol Biol》 被引量: 448发表: 2007...
VitaPad: visualization tools for the analysis of pathway data 作者:Holford M; Li NX; Nadkarni P; Zhao HY* 来源:Bioinformatics, 2005, 21(8): 1596-1602. DOI:10.1093/bioinformatics/bti153 摘要 Motivation: Packages that support the creation of pathway diagrams are limited by their inability to ...
Pathway analysis tools and toxicogenomics reference databases for risk assessment 来自 国家科技图书文献中心 喜欢 0 阅读量: 63 作者: Ganter, Brigitte, Zidek, Nadine, Hewitt, Philip R, Müller, Dieter, Vladimirova, Antoaneta 摘要: The pharmaceutical industry has begun to leverage a range of new...
Pathway 434 Tools version 13.0: integrated software for pathway/genome informatics and systems 435 biology. Brief Bioinform. 2010;11: 40-79. doi:10.1093/... PD Karp,SM Paley,M Krummenacker,... 被引量: 64发表: 2009年 MicroRNA and mRNA integrated analysis (MMIA): a web tool for examining...
It supports web publishing of PGDBs and provides a large number of query, visualization, and omics-data analysis tools. Scientists around the world have created more than 9,800 PGDBs by using Pathway Tools, many of which are curated databases for important model organisms. Those PGDBs can be...
Pathway/Genome Navigator:Supports query, visualization, and analysis of PGDBs. The Navigator powers the BioCyc web site atBioCyc.org. MetaFlux:Supports development and execution of metabolic flux models. Pathway/Genome Editors:Provide interactive editing capabilities for PGDBs. ...
Second, should we use the p-value or rank as the threshold to obtain the enriched pathway? Due to the plethora of GSE methods and their distinct performances, selecting the proper tool and/or criteria for analysis is challenging. Recently, two ensemble GSE methods were proposed to solve the ...
mpwt needs at leastPython 3.8. It has been tested on Ubuntu and macOS but it is not working on Windows. mpwt requires three python depedencies (biopython,chardetandgffutils) andPathway Tools. For the multiprocessing, mpwt uses themultiprocessing library of Python 3. ...
This chapter provides a guide to utilizing the available bioinformatics tools on the World Wide Web for sequence alignment, editing, and multilocus phylogenetic analysis. 展开 关键词: Bioinformatics Tools Softwares Databases Multilocus phylogenetic analysis Fungi ...