Transcriptome analysis showed that the expression of a large number of genes related to leukocyte migration and chemotaxis consistently increased in the lungs upon exposure to RT, and the expression of genes tha
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In this study, we identified representative developmental stages of lettuce achenes and performed time-course transcriptome analysis of the achenes at five developmental stages. We analyzed gene activity during achene development and proposed possible mechanisms that may influence achene development. Our ...
Long-read sequencing (LRS) has become a standard approach for transcriptome analysis in recent years. Bovine alphaherpesvirus 1 (BoHV-1) is an important pathogen of cattle worldwide. This study reports the profiling of the dynamic lytic transcriptome of
Using a time-course RNA-seq analysis we identified transcriptomic changes during formation of nodule-like structures (NLS) in rice and compared rice RNA-seq dataset with a nodule transcriptome dataset in Medicago truncatula .Plant hormones can induce the formation of nodule-like structures (NLS) in...
Here, we report the high-quality whole-genome sequence, candidate effectors and ginseng–pathogen interaction transcriptome analysis ofI.robustaCD-56. The results provide a foundation for elucidating the mechanisms of the chronic pathogenicity of this pathogen. CD-56 initiates pathogenicity- and virulenc...
A visualization tool has also been implemented to tackle the dynamics of the transcriptome. Additional material Additional file 1: Additional tables. This file contains additional tables mention on the text (pdf format). Additional file 2: Figure 2 Heat map values. This file contains the values ...
Due to insufficiencies in transcriptome to proteome correlation, characterising the proteome of HLCs is essential to provide a suitable framework for their continual optimization. Here we interrogated the proteome during stepwise differentiation of hiPSCs into HLCs over 40 days. Whole cell protein ...
In order to address the mechanisms underlying radioresistance on a molecular level, next we therefore performed unbiased transcriptome analyses of the CAL-33 subclones. mRNA gene expression analysis of the CAL-33 subclones Microarray analyses allowed the identification of differences in basal gene ...
3.4. Clustering analysis captures patterns of transcriptome change during time-course 3D spheroid culture Clustering analysis was performed to assess the changes in the transcriptome over the course of HepG2/C3A 3D spheroid culture. We carried out K-means clustering to further assess the changes in...