确认你使用的FTP服务器地址ftp.ncbi.nlm.nih.gov是正确的,并且该服务器当前是可访问的。你可以尝试在浏览器中访问该地址或使用FTP客户端进行连接测试。 检查本地防火墙或网络防火墙设置: 确保没有防火墙或代理设置阻止了对ftp.ncbi.nlm.nih.gov的访问。你可以检查本地计算机的防火墙设置,或者询问你的网络管理员是否有相
In this part, the dataset is from the Gene Expression Omnibus (GEO) at http://www.ncbi.nlm.nih.gov/geo/ (GEO accession: GSE30052)34,50. This dataset contains 5,744 probe sets, 10,928 genes and 49 time points. In order to validate the parallel performance of MPRGEP, one subset from...
Data availability Raw sequences were submitted and are currently under evaluation at NCBI BioProject database under Project ID PRJNA516816 (http://www.ncbi.nlm.nih.gov/bioproject/516816).References Adams, R. I., Bateman, A. C., Bik, H. M., & Meadow, J. F. (2015). Microbiota of the...
excelsior reference genome [55] (https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_019097785.1/) was first indexed using the routine hisat2-build from Hisat2 v.2.1.0 [46], and the resulting pre-processed reads were then mapped with the option –score-min L,0,-0.2. After converting ...
In this work, in both the static and the time series datasets, the analysis is done to study the entire model/pathway rather than find a particular solution to the model/pathway. Thus global sensitivity analysis is employed. But the local sensitivity methods are used to observe and compare ...
Combination, Order of Anti-HIV Drugs Make a Difference in First-time RecipientsJennifer Wengerjwengerniaid.nih.govNational Institutes of Health
As additional ZIKV waves are possible in summer 2017, public health professionals will continue to face considerable uncertainty in gauging the severity, geo- graphic range of local outbreaks, and appropriate timing of interventions, given the large fraction of undetected ZIKV cases (asymptomatic) and...
precursor predictions, suggesting the cell type persistence test can be applied to other datasets without a known ground truth. Through our analyses, we have identified guiding principles on the choice of hyperparameters: First of all, the entropic regularization parameter...
The detection and analysis of steady-state gene expression has become routine. Time-series microarrays are of growing interest to systems biologists for deciphering the dynamic nature and complex regulation of biosystems. Most temporal microarray data on
we provide a novel and unbiased time-resolved set of genes whose expression patterns correlate strongly with T-cell stimulation processes. We performed a meta-analysis of T-cell activation using time-series transcriptome datasets to develop kinetic consensus gene signatures across multiple T-cell popula...