We can use Venn diagrams to represent sets pictorially. Venn diagrams are especially useful for showing relationships between sets, such as the intersection and union of overlapping sets. Illustrate the 3 circle Venn Diagram with this template....
G: Venn diagram illustrating conserved alteration of gene expression in Vav1−/−, Vav2−/−, and Vav3−/− RAW264.7 cells. Differentially expressed genes were identified by comparison to WT RAW264.7 cells. The analysis was performed by the GeneVenn web-based tool (http://genevenn...
Venn diagram with number of genes present in each platform, genes in common between platforms, and genes in common among all three platforms. Full size image Comparison of expression ratios An estimate of the concordance of the platforms was provided by the percentage of genes that showed expressi...
Then, 7 μl reverse transcription mix (1× SSII first-strand buffer, 1 U μl−1 RNase inhibitor, 10 U μl−1 SSII RTase, 1 mM GTP, 5 mM dithiothreitol, 1 M betaine, 6 mM MgCl2 and 1 μM template switch oligonucleotide) was added, incubated at 42 °...
A PCA; B Summary of the identified DEGs; C Venn diagram of DEGs between PpCK and other groups; D Venn diagram of DEGs between Pp35D and other groups; E The clustered and heatmap analysis of DEGs Full size image Short time-series expression miner analysis (STEM) and gene set enrichment ...
Long-read SMRT sequencing was performed as below. Briefly, genomic DNA from nucleated blood cells was sheared to ~20 kb and used for library preparation with a DNA template prep kit 2.0 (Pacific Biosciences; Menlo Park, CA). Size selection was carried out using the Blue Pippin system (Sag...
(θπratios) andFSTvalues calculated in 10-kb sliding windows between TC and the lowland group of goat breeds (including CB, JT, MD, and MN).dVenn diagram for the positively selected genes identified in TC from two different comparisons (i.e., TC versus Bezoar ibex and TC versus the ...
A, B and C: Venn diagram of different groups at the OTU level (A: in the roots of GE, GD_roadside, GD_understory and GA groups; B: in the rhizosphere soil of GE, GD_roadside, GD_understory and GA groups; C: in the root and rhizosphere soil ...
The Venn diagram showed that the core microbiomes in the H and control groups were related when we looked at the number of total unique OTUs (10.52–10.82%). However, the M complement doses of Lactobacillus spp. remained too closely related to CTX alone conditions (15.07%; Figure 2A). ...
Figure 2.The Venn diagram illustrates the shared upregulated genes among the top 50 genes exhibiting the highest induction across the three cold treatments at 0 °C, 4 °C, and 10 °C. Table 2shows the 31 genes shared at the three low temperatures (seeFigure 2), listed in descending ord...