human genetics analysisbiological databasesBAMThe University of California Santa Cruz (UCSC) Genome Browser is a popular Web-based tool for quickly displaying a requested portion of a genome at any scale, accompanied by a series of aligned annotation "tracks." The annotations-generated by the UCSC...
Jung, P. Angulo and the rest of the scientists at UCSC and around the world for making these tracks of molecular information possible. The UCSC Human Genome Browser software, quality control and training are funded by the NIH National Human Genome Research Institute, currently with grant 5U41...
Genome Browser On June 22, 2000, UCSC and the other members of the International Human Genome Project consortium completed the first working draft of the human genome assembly, forever ensuring free public access to the genome and the information it contains. A few weeks later, on July 7, the...
The Human Genome Browser at UCSC. Genome Res. 2002;12(6):996–1006. Article CAS PubMed PubMed Central Google Scholar Manichaikul A, Mychaleckyj JC, Rich SS, Daly K, Sale M, Chen WM. Robust relationship inference in genome-wide association studies. Bioinformatics. 2010;26(22):2867–...
et al. The human genome browser at UCSC. Genome Res. 12, 996–1006 (2002). Article CAS PubMed PubMed Central Google Scholar Boroviak, T. et al. Single cell transcriptome analysis of human, marmoset and mouse embryos reveals common and divergent features of preimplantation development. ...
et al. The human genome browser at UCSC. Genome Res. 12, 996–1006 (2002). CAS Google Scholar Ye, J., Ma, N., Madden, T. L. & Ostell, J. M. IgBLAST: an immunoglobulin variable domain sequence analysis tool. Nucleic Acids Res. 41, W34–W40 (2013). Google Scholar Jones, ...
Start-gain mutations can introduce novel start codons and generate novel coding sequences that may affect the function of genes. In this study, we systematically investigated the novel start codons that were either polymorphic or fixed in the human genom
Kent WJ, Sugnet CW, Furey TS, Roskin KM, Pringle TH, Zahler AM, Haussler D: The human genome browser at UCSC. Genome Res. 2002, 12 (6): 996-1006. Article PubMed Central CAS PubMed Google Scholar Langmead B, Trapnell C, Pop M, Salzberg SL: Ultrafast and memory-efficient alignme...
(stepped by 1 kb) along the human genome as described21. The enrichment of sequence reads along the genome was computed in each S phase compartment and the ratioS50, defined as the fraction of the S phase (0<S50<1) at which 50% of DNA is replicated in a defined region, was ...
et al. The human genome browser at UCSC. Genome Res 12, 996–1006 (2002). Article CAS PubMed PubMed Central Google Scholar Schindelin, J. et al. Fiji: an open-source platform for biological-image analysis. Nat. Methods 9, 676–682 (2012). Article CAS PubMed Google Scholar Labow,...