MS2 library spectra within the Massbank of North America (MoNA) measured with Orbitrap instruments do not show specific fragments for the two sugars of interest (Figure S2) [35]. Consequently, emphasis was placed on the separation of sugar isomers in the LC dimension. For the establishment of ...
MassBank Europe is a core service for NORMAN as well as for other initiatives such as HBM4EU (Human Biomonitor- ing for Europe) initiative [30], ELIXIR [31], the Ger- man Network for Bioinformatics Infrastructure (de. NBI) [32] and the German National Research Data Infrastructure Initiative...
We can find here the MassBank project [84], an effort to create a public repository for publishing and storing the results of the analyses. Based on Galaxy, UMSA can leverage dozens of mass-spec-related tools published by the community. An ongoing effort is to provide Galaxy-based ...
She is involved in and organizes several European and worldwide activities to improve the exchange of data, information and ideas between scientists, including NORMAN-SLE, MassBank, MetFrag and PubChemLite for Exposomics [8]. EEB is the Program Head of Chemistry at the National Center for ...
Environmental Sciences Europe (2022) 34:104 https://doi.org/10.1186/s12302-022-00680-6 RESEARCH Open Access The NORMAN Suspect List Exchange (NORMAN‑SLE): facilitating European and worldwide collaboration on suspect screening in high resolution mass spectrometry Hiba Mohammed Taha1 ...
pgcon tent=mainPage), MassBank Japan (http://www.massbank. jp/), MassBank Europe (https://massbank.eu/MassBank/), MassBank North America (https://mona.fiehnlab.ucdavis. edu/) Supernatural II (https://b io...
Article20 June 2022 Composition and acquisition of the microbiome in solitary, ground-nesting alkali bees ArticleOpen access04 February 2021 Effect ofNosema ceranaeinfection and season on the gut bacteriome composition of the European honeybee (Apis mellifera) ...
6% of the overall ion identities in our test datasets, indicating spectral bias in public MS2libraries such as MassBank of North America (66% [M + H]+) and GNPS (65% [M + H]+) (Fig.6), and suggests that the community should provide MS2spectra for other ion species of...
calculated for the first time (Fig. 3). The InChIKey, the hashed version of the full standard IUPAC InChI, was used to compare the compound lists from each database. Structural information collected from HMDB, MassBank, GNPS (http://gnps.ucsd.edu/), and ReSpect (//spectra.psc.riken.jp...
MZmine 2 incorporates functions to directly query Kyoto Encyclopedia of Genes and Genomes (KEGG), HMDB, Yeast Metabolome Database (YMDB), LipidMaps, the European MassBank, Chemspider, and Metacyc [184]. MS-DIAL allows for the uploading and automatic matching of spectra against u...