These complete cp genomic sequences have enabled various comparative analyses, including phylogenetic studies, that are based on these data [3–7]. In contrast, however, the complete cp genome nucleotide sequences of only three gymnosperm species, Cycas taitungensis [8], Pinus thunbergii [9], ...
each pair designed to amplify a specific region, may be used to capture hundreds of sequences in one PCR run (Figure 6). PCR enables limited sample input and a faster workflow. However, the quality and coverage of the data ...
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Since 449 out of 460 samples (97.6%) had over 10 million paired-end reads for downstream analysis, we did not subsample the sequences to the lowest sequencing depth to avoid data loss. To ensure the comparability of our analysis with several large CRC microbiome studies, we calculated the ...
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In Physcomitrium patens, PpRH1/PpRH2 are GUCT-domain-containing DEAD-BOX RNA helicases localize to the nucleus. They are implicated in cell and tissue deve
Figure7illustrates the overall architecture of our iDNA-ABF. Figure7A shows the data set collection procedure, which is described in “Datasets” section. The workflow of iDNA-ABF is clearly seen in Fig.7B–E, mainly consisting of four modules: (B) Multi-scale data processing module, (C) ...
sequences against a large reference genome that aim to reflect the confidence of its mapping to the chimpanzee genome have been used. Further adequate thresholds and restrictions to filter out the tentative nucleotides were applied. For the remaining data, the total number of transversion ...
Understanding the mechanisms underlying differentiation of inflorescence and flower meristems is essential towards enlarging our knowledge of reproductive organ formation and to open new prospects for improving yield traits. Here, we show that SlDOF9 is
Of gene expression and cell division time: a mathematical framework for advanced differential gene expression and data analysis. Cell Syst. 9, 569–579 (2019). This study formalizes the role of cell cycle time in the context of gene expression. CAS PubMed Google Scholar Wilhelm, M. et al...