The Arabidopsis Information Resource The model organism database for Arabidopsis thaliana 8followers United States of America https://www.arabidopsis.org info@phoenixbioinformatics.org Popular repositoriesLoading toastdos-backtoastdos-backPublic The back-end system for the GOAT community annotation tool...
Lamesch P, Dreher K, Swarbreck D, Sasidharan R, Reiser L, Huala E: Using the Arabidopsis information resource (TAIR) to find information about Arabidopsis genes. Curr Protoc Bioinformatics 2010, Chapter 1:Unit1.11.Reiser L, Rhee SY: Using the Arabidopsis Information Resource (TAIR) to find ...
(2010) Using the Arabidopsis Information Resource (TAIR) to find information about Arabidopsis genes. Curr Protoc Bioinformatics . Chapter 1:Unit1.11Lamesch P , Dreher K , Swarbreck D , Sasidharan R , Reiser L , Huala E. 2010 . Using the Arabidopsis Information Resource (TAIR) to find ...
The Arabidopsis Information Resource (TAIR, http://arabidopsis.org) is a genome database for Arabidopsis thaliana, an important reference organism for many fundamental aspects of biology as well as basic and applied plant biology research. TAIR serves as a central access point for Arabidopsis data,...
Extrinsic features were derived from external ChIP-Seq or BS-Seq libraries as well as annotations including different types of transposon, types of repeated sequence (direct, dispersed, inverted), and other genetic elements from The Arabidopsis Information Resource (TAIR10)21. We also included ...
The Arabidopsis information resource. http//www.arabidopsis.org, Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R: 1000 Genome project data processing subgroup: the sequence alignment/map format and SAMtools. Bioinformatics. 2009, 25 (16): 2078-20...
Z. et al. The Arabidopsis information resource: making and mining the “gold standard” annotated reference plant genome. Genesis 53, 474–485 (2015). Article CAS PubMed PubMed Central Google Scholar International Brachypodium Initiative. Genome sequencing and analysis of the model grass ...
tabacum were retrieved from the Arabidopsis Information Resource (TAIR10, https://www.arabidopsis.org) and the Sol Genomics Network (https://solgenomics.net/organism/Nicotiana_tabacum/genome). To identify the NPF homologs in tobacco, the NPF protein sequences from Arabidopsis were used as queries...
Anthocyanin, carotenoid, chlorophyll, isoprenoids, lipid, and sugar metabolism-related genes, as well as photosynthesis genes functionally characterized inA. thalianawere retrieved for their corresponding protein sequences from the Arabidopsis Information Resource (TAIR) (https://www.arabidopsis.org/index....
Swarbreck D, Wilks C, Lamesch P, Berardini TZ, Garcia-Hernandez M, Foerster H, Li D, Meyer T, Muller R, Ploetz L, Radenbaugh A, Singh S, Swing V, Tissier C, Zhang P, Huala E: The Arabidopsis Information Resource (TAIR): gene structure and function annotation. Nucleic Acids Res. ...