accurate prediction of ligands able to bind to MHC class II molecules is more difficult due to the variable lengths of binding peptides and the high abundance of MHC class II binding epitopes[75]. Moreover, considering that CD8+CTLshave been demonstrated to recognize peptide epitopes derived fro...
Adrienne Tin, Jonathan Marten, Victoria L. Halperin Kuhns, Yong Li, Matthias Wuttke, Holger Kirsten, Karsten B. Sieber, Chengxiang Qiu, Mathias Gorski, Zhi Yu, Ayush Giri, Gardar Sveinbjornsson, Man Li, Audrey Y. Chu, Anselm Hoppmann, ...
In equations (1) and (2),\(Y\)refers to the dependent variable (\(YDisease\)is binary phenotype trait and\(Y{Value}\)refers to quantitative phenotype value),\(XBinValue\)refers to the contribution of individual to a gene bin,\({\beta }_{0}\)is the beta coefficent of the model ...
[9]. The ARACNE plugin available for Cytoscape v3.1.1 was used [10]. Network calculation was performed using the Aracne Complete Mode, with the variable bandwidth mutual information algorithm, data processing inequality (DPI) tolerance of 0, and six mutual information steps. Different MI ...
The ANOVA with d' as a dependent variable revealed a significant main effect of prevalence, F(1, 69) = 12.83, p < .001, ηp2 = .16; a significant main effect of time on task F(1.99, 136.97) = 3.62, p = .030, ηp2 = .05; and no effect of breaks, F(1, 69) = .80, ...
Once defined, you can refer to a variable by name. Expressions are evaluated using the embedded JavaScript engine. The assert keyword can be used to assert that an expression returns a boolean value. Given def color = 'red ' And def num = 5 Then assert color + num == 'red 5' Every...
Simpson’s index of diversity MLST: Multilocus sequence typing MLVA: Multilocus variable number of tandem repeats analysis PCR: Polymerase chain reaction SNPs: Single nucleotide polymorphisms W: Wallace coefficient of concordance.References Joseph SJ, Read TD: Bacterial population genomics and infec...
MSHT parton distributions. This can be taken to stand for “Mass Scheme Hessian Tolerance”. We were the first group to obtain the PDFs via the use of a general mass variable flavour number scheme in [7] and have continued to do this ever since. The uncertainties on the PDFs have ...
Since base editing outcomes are site- and context-dependent1,5,18, identification of the most generalizable tools can best be achieved through survey of a large number of sequence-diverse sites that display variable on-target editing frequencies when targeted with the current standard set of BEs....
(>35 °C), and precipitation95. Additionally, because we modelled visitation across the entire Mesoamerican Reef region, we included a categorical variable for country and a controlling variable for the size of the grid cell. Variables were rescaled to fall between 0 and 1, then checked for...